RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 UBP1Q9NZI7 540 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 TCFL5Q9UL49 500 aa5.01□□□□□ -1.61
HMGB3P11-201ENST00000440127 CUX2O14529 1486 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 FANCD2Q9BXW9 1451 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 PEX10O60683 326 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 LRRN2O75325 713 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 NME1P15531 152 aaKnown RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 RPL10P27635 214 aaKnown RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 PDE6BP35913 854 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 CRKP46108 304 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 INTS3Q68E01 1043 aaKnown RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 TAB3Q8N5C8 712 aaPredicted RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 INTS4Q96HW7 963 aaKnown RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 TM9SF2Q99805 663 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 RNF32Q9H0A6 362 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 FBXL21Q9UKT6 434 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 ZNRF3Q9ULT6 936 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 YBX2Q9Y2T7 364 aaKnown RBP5□□□□□ -1.61
HMGB3P11-201ENST00000440127 SLC12A7Q9Y666 1083 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 PRDM2Q13029 1718 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 FGD5Q6ZNL6 1462 aa5□□□□□ -1.61
HMGB3P11-201ENST00000440127 OR14I1A6ND48 311 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 HRKO00198 91 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 RFXAPO00287 272 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 ABLIM1O14639 778 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 SCAMP3O14828 347 aaKnown RBP4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 DNAJA2O60884 412 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 SYPP08247 313 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 MED14OSP0DP75 135 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 VAMP1P23763 118 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 ARL4AP40617 200 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CLCQ05315 142 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CWF19L1Q69YN2 538 aaKnown RBP4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CIAPIN1Q6FI81 312 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 TMEM132EQ6IEE7 984 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 VWCEQ96DN2 955 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 TCTN2Q96GX1 697 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 MAP6Q96JE9 813 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 FCRL2Q96LA5 508 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 SLC6A18Q96N87 628 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CRBNQ96SW2 442 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 DSCC1Q9BVC3 393 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CHST7Q9NS84 486 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 TNFRSF10DQ9UBN6 386 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 TAF6LQ9Y6J9 622 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 CARMIL1Q5VZK9 1371 aa4.99□□□□□ -1.61
HMGB3P11-201ENST00000440127 SHISA3A0PJX4 238 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 WASH4PA8MWX3 477 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 PRAMEF1O95521 474 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 GSNP06396 782 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 SIAH1Q8IUQ4 282 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 LRRC56Q8IYG6 542 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 ZNF654Q8IZM8 581 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 LINC01599Q8WXQ3 324 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 MRRFQ96E11 262 aaKnown RBP4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 CRTAC1Q9NQ79 661 aa4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 SUCOQ9UBS9 1254 aaKnown RBP4.98□□□□□ -1.61
HMGB3P11-201ENST00000440127 ARAP1Q96P48 1450 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 WTIPA6NIX2 430 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 NRDCO43847 1150 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 POLR2BP30876 1174 aaKnown RBP4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 BMP8BP34820 402 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 ERVFC1P60507 584 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 FANCCQ00597 558 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 KCNA10Q16322 511 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 FBXW10Q5XX13 1052 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 CEP128Q6ZU80 1094 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 CCDC144CPQ8IYA2 1237 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 KCNN1Q92952 543 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 BACH2Q9BYV9 841 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 FOXP3Q9BZS1 431 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 C19orf44Q9H6X5 657 aa4.97□□□□□ -1.61
HMGB3P11-201ENST00000440127 DNMBPQ6XZF7 1577 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 TRHRP34981 398 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 PMS1P54277 932 aaKnown RBP4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 LAPTM5Q13571 262 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 AUHQ13825 339 aaKnown RBP4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 FBLN7Q53RD9 439 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 ATG14Q6ZNE5 492 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 TMC3Q7Z5M5 1100 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF605Q86T29 641 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 TMEM151BQ8IW70 566 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 NAT16Q8N8M0 369 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 OR6P1Q8NGX9 317 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 EAF1Q96JC9 268 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 PRDM14Q9GZV8 571 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF281Q9Y2X9 895 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 SF3B6Q9Y3B4 125 aaKnown RBP4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 NESP48681 1621 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 TOPBP1Q92547 1522 aa4.96□□□□□ -1.62
HMGB3P11-201ENST00000440127 LAMC3Q9Y6N6 1575 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 ARHGAP35Q9NRY4 1499 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 TEX51A0A1B0GUA7 166 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQ27 194 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQ64 194 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQC6 194 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQD8 194 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms