RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZKSCAN1P17029 563 aaPredicted RBP27.85■■■□□ 2.05
VARS-217ENST00000440048 CCL14Q16627 93 aa27.85■■■□□ 2.05
VARS-217ENST00000440048 KCTD1Q719H9 257 aa27.85■■■□□ 2.05
VARS-217ENST00000440048 ZKSCAN3Q9BRR0 538 aa27.85■■■□□ 2.05
VARS-217ENST00000440048 U3KPZ7 1027 aaPredicted RBP27.85■■■□□ 2.05
VARS-217ENST00000440048 ZBED4O75132 1171 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 STAT2P52630 851 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 FAM160B2Q86V87 743 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 CHURC1Q8WUH1 139 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 DCAF4Q8WV16 495 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 KRT23Q9C075 422 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 SLC38A10Q9HBR0 1119 aa27.84■■■□□ 2.05
VARS-217ENST00000440048 PLA2G6O60733 806 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 HOXC6P09630 235 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 ADORA2AP29274 412 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 NPLOC4Q8TAT6 608 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 ESYT1Q9BSJ8 1104 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 TEX13BQ9BXU2 312 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 CNNM2Q9H8M5 875 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 ZSWIM5Q9P217 1185 aa27.83■■■□□ 2.05
VARS-217ENST00000440048 CTDP1Q9Y5B0 961 aaPredicted RBP27.83■■■□□ 2.05
VARS-217ENST00000440048 CYP21A2P08686 494 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 COPB2P35606 906 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 GJA8P48165 433 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 IKQ13123 557 aaPredicted RBP27.82■■■□□ 2.04
VARS-217ENST00000440048 PRPF38BQ5VTL8 546 aaKnown RBP27.82■■■□□ 2.04
VARS-217ENST00000440048 SNRNP48Q6IEG0 339 aaKnown RBP27.82■■■□□ 2.04
VARS-217ENST00000440048 IQCA1Q86XH1 822 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 ABRAQ8N0Z2 381 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 CPXCR1Q8N123 301 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 MAP4K1Q92918 833 aa27.82■■■□□ 2.04
VARS-217ENST00000440048 ATP2A1O14983 1001 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 FCER1AP12319 257 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 CAPN2P17655 700 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 CCDC96Q2M329 555 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 CCDC178Q5BJE1 867 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 MAP3K21Q5TCX8 1036 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 DPP9Q86TI2 863 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 DGKHQ86XP1 1220 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 SHISA4Q96DD7 197 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 RAVER2Q9HCJ3 691 aaKnown RBP27.81■■■□□ 2.04
VARS-217ENST00000440048 PAK6Q9NQU5 681 aaPredicted RBP27.81■■■□□ 2.04
VARS-217ENST00000440048 FLRT1Q9NZU1 646 aa27.81■■■□□ 2.04
VARS-217ENST00000440048 COBLO75128 1261 aa27.8■■■□□ 2.04
VARS-217ENST00000440048 FDX1P10109 184 aa27.8■■■□□ 2.04
VARS-217ENST00000440048 PRKAR2AP13861 404 aaKnown RBP27.8■■■□□ 2.04
VARS-217ENST00000440048 KIAA1211Q6ZU35 1233 aa27.8■■■□□ 2.04
VARS-217ENST00000440048 ZSCAN10Q96SZ4 725 aaPredicted RBP27.8■■■□□ 2.04
VARS-217ENST00000440048 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.8■■■□□ 2.04
VARS-217ENST00000440048 RIPK3Q9Y572 518 aa27.8■■■□□ 2.04
VARS-217ENST00000440048 RPTORQ8N122 1335 aa27.8■■■□□ 2.04
VARS-217ENST00000440048 CACNB2Q08289 660 aaPredicted RBP27.79■■■□□ 2.04
VARS-217ENST00000440048 U2AF1L4Q8WU68 220 aaKnown RBP27.79■■■□□ 2.04
VARS-217ENST00000440048 ANKS1AQ92625 1134 aa27.79■■■□□ 2.04
VARS-217ENST00000440048 DEFB118Q96PH6 123 aa27.79■■■□□ 2.04
VARS-217ENST00000440048 MMP19Q99542 508 aa27.79■■■□□ 2.04
VARS-217ENST00000440048 LSG1Q9H089 658 aaKnown RBP27.79■■■□□ 2.04
VARS-217ENST00000440048 HMX1Q9NP08 348 aaPredicted RBP27.79■■■□□ 2.04
VARS-217ENST00000440048 RBM8AQ9Y5S9 174 aaKnown RBP27.79■■■□□ 2.04
VARS-217ENST00000440048 TAF6LQ9Y6J9 622 aa27.79■■■□□ 2.04
VARS-217ENST00000440048 CEP290O15078 2479 aa27.79■■■□□ 2.04
VARS-217ENST00000440048 SGPL1O95470 568 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 PDHBP11177 359 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 SLC4A3P48751 1232 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 OAZ1P54368 228 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 TTBK2Q6IQ55 1244 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 ENAHQ8N8S7 591 aaPredicted RBP27.78■■■□□ 2.04
VARS-217ENST00000440048 PRR12Q9ULL5 1215 aa27.78■■■□□ 2.04
VARS-217ENST00000440048 TNKSO95271 1327 aa27.77■■■□□ 2.04
VARS-217ENST00000440048 FRMPD2Q68DX3 1309 aaPredicted RBP27.77■■■□□ 2.04
VARS-217ENST00000440048 TRDNQ13061 729 aa27.77■■■□□ 2.04
VARS-217ENST00000440048 MFSD14CQ5VZR4 134 aa27.77■■■□□ 2.04
VARS-217ENST00000440048 ERICH6BQ5W0A0 696 aa27.77■■■□□ 2.04
VARS-217ENST00000440048 CYB5R4Q7L1T6 521 aa27.77■■■□□ 2.04
VARS-217ENST00000440048 IGHA2P01877 340 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 SNHG28P0DPA3 235 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 KCTD2Q14681 263 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 BTNL9Q6UXG8 535 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 UBAC1Q9BSL1 405 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 GPCPD1Q9NPB8 672 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 PPP4R2Q9NY27 417 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 SLC5A4Q9NY91 659 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 PLXNA1Q9UIW2 1896 aa27.76■■■□□ 2.03
VARS-217ENST00000440048 ZNF536O15090 1300 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 E7EWF7 191 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 SLC16A2P36021 539 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 SNAP25P60880 206 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 OLFML2BQ68BL8 750 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 PNMA1Q8ND90 353 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 KAT14Q9H8E8 782 aa27.75■■■□□ 2.03
VARS-217ENST00000440048 CDC45O75419 566 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 PGK2P07205 417 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 ZNF543Q08ER8 600 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 SYDE2Q5VT97 1194 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 STOX1Q6ZVD7 989 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 CRISPLD2Q9H0B8 497 aa27.74■■■□□ 2.03
VARS-217ENST00000440048 TFRCP02786 760 aaKnown RBP27.73■■■□□ 2.03
VARS-217ENST00000440048 CCND3P30281 292 aaPredicted RBP27.73■■■□□ 2.03
VARS-217ENST00000440048 CYP2C19P33261 490 aa27.73■■■□□ 2.03
VARS-217ENST00000440048 CCDC174Q6PII3 467 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms