RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 GPR108Q9NPR9 543 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 TNKSO95271 1327 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 MED1Q15648 1581 aaPredicted RBP13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 PBX1P40424 430 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 SPA17Q15506 151 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 HLFQ16534 295 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 AKR1B10O60218 316 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 IFT88Q13099 833 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 MAATS1Q7Z4T9 603 aa13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 PACSIN2Q9UNF0 486 aaPredicted RBP13.89□□□□□ -0.19
SLC38A1-202ENST00000439706 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 TRADDQ15628 312 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 SETQ01105 290 aaPredicted RBP13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 WDR93Q6P2C0 686 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 WDR59Q6PJI9 974 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 NFU1Q9UMS0 254 aa13.88□□□□□ -0.19
SLC38A1-202ENST00000439706 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 HSF2BPO75031 334 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 CCDC91Q7Z6B0 441 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 LTN1O94822 1766 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 NNTQ13423 1086 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■■■■ 27.2
SLC38A1-202ENST00000439706 E2F5Q15329 346 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 ODF2Q5BJF6 829 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 FBXL16Q8N461 479 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 SPATA5Q8NB90 893 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
SLC38A1-202ENST00000439706 CYP7A1P22680 504 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 GUCY2DQ02846 1103 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 TDRD12Q587J7 1177 aaKnown RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CXorf56Q9H5V9 222 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CYLC1P35663 651 aaPredicted RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 KRT83P78385 493 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CKAP4Q07065 602 aaKnown RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CT47A1Q5JQC4 288 aaPredicted RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 SGMS1Q86VZ5 419 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 KLHL7Q8IXQ5 586 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 IFIH1Q9BYX4 1025 aaKnown RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 KRT23Q9C075 422 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 E7EVH7 732 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 RDXP35241 583 aaKnown RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 LIFRP42702 1097 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 NOC4LQ9BVI4 516 aaKnown RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM153AQ9UHL3 310 aa13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
SLC38A1-202ENST00000439706 CIAO1O76071 339 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 UBA7P41226 1012 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 RASSF7Q02833 373 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 CCDC155Q8N6L0 562 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 EPB41L5Q9HCM4 733 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 LAMA4Q16363 1823 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 CARSP49589 748 aaKnown RBP13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 C8orf74Q6P047 294 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 CATIPQ7Z7H3 387 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 SPATA4Q8NEY3 305 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 FAM184BQ9ULE4 1060 aa13.85□□□□□ -0.19
SLC38A1-202ENST00000439706 MYH8P13535 1937 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms