RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CNTNAP5Q8WYK1 1306 aa8.69□□□□□ -1.02
UBR3-205ENST00000439681 DOCK1Q14185 1865 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 SLC10A3P09131 477 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 GJB2P29033 226 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 HOXA7P31268 230 aaPredicted RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 DDIT3P35638 169 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 GTF2A2P52657 109 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 SYDE2Q5VT97 1194 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 CHURC1Q8WUH1 139 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 BRI3BPQ8WY22 251 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 RNF26Q9BY78 433 aaPredicted RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 ORC3Q9UBD5 711 aaPredicted RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 HSP90AA1P07900 732 aaKnown RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 CETPP11597 493 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 STAT2P52630 851 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 SNAP25P60880 206 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 HMGN5P82970 282 aaKnown RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 POTEEQ6S8J3 1075 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 FASTKD5Q7L8L6 764 aaKnown RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 FAM160B2Q86V87 743 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 PIBF1Q8WXW3 757 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 AIFM3Q96NN9 605 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 PIGSQ96S52 555 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 PTPN18Q99952 460 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 CREBZFQ9NS37 354 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 ISY1Q9ULR0 285 aaKnown RBP8.68□□□□□ -1.02
UBR3-205ENST00000439681 AGTPBP1Q9UPW5 1226 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 STK36Q9NRP7 1315 aa8.68□□□□□ -1.02
UBR3-205ENST00000439681 PPP1R11O60927 126 aaPredicted RBP8.67□□□□□ -1.02
UBR3-205ENST00000439681 DSG3P32926 999 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 COG2Q14746 738 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
UBR3-205ENST00000439681 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 TANGO6Q9C0B7 1094 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 OTOFQ9HC10 1997 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 CWC22Q9HCG8 908 aaKnown RBP8.67□□□□□ -1.02
UBR3-205ENST00000439681 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 ADAMTS5Q9UNA0 930 aa8.67□□□□□ -1.02
UBR3-205ENST00000439681 CCL15-CCL14A0A0B4J2E2 113 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 RASSF10A6NK89 507 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 BTBD19C9JJ37 291 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 FLOT1O75955 427 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 DEXIO95424 95 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 IKQ13123 557 aaPredicted RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 CCL15Q16663 113 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 PFKFB3Q16875 520 aaPredicted RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 ZIC5Q96T25 663 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 P2RX7Q99572 595 aaKnown RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 RANBP17Q9H2T7 1088 aaKnown RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 GJB4Q9NTQ9 266 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 PHIPQ8WWQ0 1821 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 MYH8P13535 1937 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 ZBTB5O15062 677 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 SCG2P13521 617 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 QRICH1Q2TAL8 776 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 CYP4F22Q6NT55 531 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 ALG1Q9BT22 464 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 ASCC2Q9H1I8 757 aaPredicted RBP8.66□□□□□ -1.02
UBR3-205ENST00000439681 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 HOXC10Q9NYD6 342 aa8.66□□□□□ -1.02
UBR3-205ENST00000439681 MANSC4A6NHS7 340 aaPredicted RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 VWA5AO00534 786 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 SYT1P21579 422 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 AKAP17AQ02040 695 aaKnown RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 CDC37Q16543 378 aaPredicted RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 OTUD7BQ6GQQ9 843 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 SAMD1Q6SPF0 538 aaPredicted RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 FAM184AQ8NB25 1140 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 RBM27Q9P2N5 1060 aaKnown RBP8.65□□□□□ -1.02
UBR3-205ENST00000439681 SLC45A1Q9Y2W3 748 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 ATAD5Q96QE3 1844 aa8.65□□□□□ -1.02
UBR3-205ENST00000439681 ZNF536O15090 1300 aa8.65□□□□□ -1.03
UBR3-205ENST00000439681 MYPNQ86TC9 1320 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms