RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 THOC1Q96FV9 657 aaKnown RBP17.61■□□□□ 0.41
DHFR-201ENST00000439211 VPS16Q9H269 839 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 JAG2Q9Y219 1238 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 EIF3HO15372 352 aaKnown RBP eCLIP17.61■□□□□ 0.41
DHFR-201ENST00000439211 PDE4BQ07343 736 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 PNMA8AQ86V59 439 aaPredicted RBP17.61■□□□□ 0.41
DHFR-201ENST00000439211 NOA1Q8NC60 698 aaKnown RBP17.61■□□□□ 0.41
DHFR-201ENST00000439211 FAXDC2Q96IV6 333 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 G3BP2Q9UN86 482 aaKnown RBP17.61■□□□□ 0.41
DHFR-201ENST00000439211 GOLGA6L10A6NI86 522 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 C21orf2O43822 256 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 RBM5P52756 815 aaKnown RBP eCLIP17.61■□□□□ 0.412e-7■□□□□ 11
DHFR-201ENST00000439211 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 SPATS2Q86XZ4 545 aaKnown RBP17.61■□□□□ 0.41
DHFR-201ENST00000439211 BLZF1Q9H2G9 400 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.411e-7■■□□□ 13.5
DHFR-201ENST00000439211 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
DHFR-201ENST00000439211 E7EVH7 732 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 MCM7P33993 719 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 OXER1Q8TDS5 423 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 MMP1P03956 469 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 MAGEB6P1A0A0J9YX57 407 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 PARP9Q8IXQ6 854 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 PARD3BQ8TEW8 1205 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 EPSTI1Q96J88 318 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 PLIN2Q99541 437 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 PPANQ9NQ55 473 aaKnown RBP17.6■□□□□ 0.41
DHFR-201ENST00000439211 JADE2Q9NQC1 790 aa17.6■□□□□ 0.41
DHFR-201ENST00000439211 KRT2P35908 639 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 CAPRIN2Q6IMN6 1127 aaKnown RBP17.59■□□□□ 0.41
DHFR-201ENST00000439211 MRPL44Q9H9J2 332 aaKnown RBP17.59■□□□□ 0.41
DHFR-201ENST00000439211 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
DHFR-201ENST00000439211 PDHBP11177 359 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 IFNAR1P17181 557 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 CCDC152Q4G0S7 254 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 DYDC1Q8WWB3 177 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 KLHL33A6NCF5 533 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 COG1Q8WTW3 980 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 TNKSO95271 1327 aa17.59■□□□□ 0.41
DHFR-201ENST00000439211 MYBL2P10244 700 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 HPDP32754 393 aaPredicted RBP17.58■□□□□ 0.41
DHFR-201ENST00000439211 SF3A3Q12874 501 aaKnown RBP eCLIP17.58■□□□□ 0.41
DHFR-201ENST00000439211 MYO1EQ12965 1108 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 TRAF1Q13077 416 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 CAVIN4Q5BKX8 364 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 MSANTD4Q8NCY6 345 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 RAB21Q9UL25 225 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.41
DHFR-201ENST00000439211 SNUPNO95149 360 aaKnown RBP17.58■□□□□ 0.4
DHFR-201ENST00000439211 USP5P45974 858 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 ADCY2Q08462 1091 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 IQCEQ6IPM2 695 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 FOXP4Q8IVH2 680 aaPredicted RBP17.58■□□□□ 0.4
DHFR-201ENST00000439211 SPDYE1Q8NFV5 336 aaPredicted RBP17.58■□□□□ 0.4
DHFR-201ENST00000439211 SLC40A1Q9NP59 571 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 CYP2D7A0A087X1C5 515 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 ENC1O14682 589 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 GNAT2P19087 354 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 FMR1Q06787 632 aaKnown RBP eCLIP17.58■□□□□ 0.4
DHFR-201ENST00000439211 TUBE1Q9UJT0 475 aa17.58■□□□□ 0.4
DHFR-201ENST00000439211 FANCGO15287 622 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 FOXP2O15409 715 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 PPARAQ07869 468 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
DHFR-201ENST00000439211 CLSTN1O94985 981 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 LIFRP42702 1097 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 SNX1Q13596 522 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 PTPAQ15257 358 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 EEF2KMTQ96G04 330 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 MAGEC2Q9UBF1 373 aaPredicted RBP17.57■□□□□ 0.4
DHFR-201ENST00000439211 TSPY2A6NKD2 308 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 EIF4E1BA6NMX2 242 aaKnown RBP17.57■□□□□ 0.4
DHFR-201ENST00000439211 RANBP1P43487 201 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 PIK3AP1Q6ZUJ8 805 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
DHFR-201ENST00000439211 CPDO75976 1380 aa17.57■□□□□ 0.4
DHFR-201ENST00000439211 GYG1P46976 350 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 PPP1R7Q15435 360 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 SELENOOQ9BVL4 669 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 FAM205CA6NFA0 338 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 A6NNZ2 444 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 GOLGA8KD6RF30 607 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 TUBB8Q3ZCM7 444 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 AMOTL1Q8IY63 956 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
DHFR-201ENST00000439211 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 TTC36A6NLP5 189 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 PTPREP23469 700 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 CKAP4Q07065 602 aaKnown RBP17.56■□□□□ 0.4
DHFR-201ENST00000439211 KCNB1Q14721 858 aa17.56■□□□□ 0.4
DHFR-201ENST00000439211 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
DHFR-201ENST00000439211 SYF2O95926 243 aaKnown RBP17.55■□□□□ 0.4
DHFR-201ENST00000439211 CSF1RP07333 972 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 DDR1Q08345 913 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms