RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 GJD3Q8N144 294 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 PIH1D3Q9NQM4 214 aaKnown RBP11.91□□□□□ -0.5
SMPD4-208ENST00000439029 FBXO28Q9NVF7 368 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 A0A0G2JMZ2 1700 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 DUSP11O75319 330 aaKnown RBP11.9□□□□□ -0.5
SMPD4-208ENST00000439029 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-208ENST00000439029 UQCRFS1P1P0C7P4 283 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-208ENST00000439029 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 GRB10Q13322 594 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 TTC39AQ5SRH9 613 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
SMPD4-208ENST00000439029 VWCEQ96DN2 955 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 MEIS3Q99687 375 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 NOC4LQ9BVI4 516 aaKnown RBP11.9□□□□□ -0.5
SMPD4-208ENST00000439029 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 EHD4Q9H223 541 aa11.9□□□□□ -0.5
SMPD4-208ENST00000439029 CACNA1AO00555 2505 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 SLC25A27O95847 323 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 PTGS1P23219 599 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-208ENST00000439029 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 RIOX2Q8IUF8 465 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
SMPD4-208ENST00000439029 DIS3Q9Y2L1 958 aaKnown RBP11.89□□□□□ -0.51
SMPD4-208ENST00000439029 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-208ENST00000439029 CTAGE5O15320 804 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-208ENST00000439029 IL9P15248 144 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 STAT3P40763 770 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 ZAP70P43403 619 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 TAP1Q03518 808 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 FAM178BQ8IXR5 827 aa11.88□□□□□ -0.51
SMPD4-208ENST00000439029 MCM3APO60318 1980 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 RBAK-RBAKDNI3L0D1 243 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 RAD21O60216 631 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 B4GALT4O60513 344 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 LPXNO60711 386 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 IDH1O75874 414 aaKnown RBP11.87□□□□□ -0.51
SMPD4-208ENST00000439029 CYP2D6P10635 497 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 GJA9P57773 515 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 PSMC6P62333 389 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 ACVR2BQ13705 512 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
SMPD4-208ENST00000439029 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
SMPD4-208ENST00000439029 MAGEB6Q8N7X4 407 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 GDPD5Q8WTR4 605 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 UPF3AQ9H1J1 476 aaKnown RBP11.87□□□□□ -0.51
SMPD4-208ENST00000439029 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-208ENST00000439029 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
SMPD4-208ENST00000439029 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 ALADP13716 330 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 KCNA5P22460 613 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 ITGA7Q13683 1181 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 UBE2ZQ9H832 354 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-208ENST00000439029 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 MTUS1Q9ULD2 1270 aa11.86□□□□□ -0.51
SMPD4-208ENST00000439029 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-208ENST00000439029 VWA5AO00534 786 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 CYP2C9P11712 490 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 AKR1B1P15121 316 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMPD4-208ENST00000439029 TMCO2Q7Z6W1 182 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-208ENST00000439029 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-208ENST00000439029 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 AGBL1Q96MI9 1066 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-208ENST00000439029 RIPK3Q9Y572 518 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 SCN5AQ14524 2016 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 ZNF318Q5VUA4 2279 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 ASTN1O14525 1302 aa11.85□□□□□ -0.51
SMPD4-208ENST00000439029 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 LCHNA4D1U4 455 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 WDR46O15213 610 aaKnown RBP11.84□□□□□ -0.51
SMPD4-208ENST00000439029 ICA1Q05084 483 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 GABPAQ06546 454 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 PTCRAQ6ISU1 281 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-208ENST00000439029 MAMDC4Q6UXC1 1216 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 HFE2Q6ZVN8 426 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 REPS2Q8NFH8 660 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 PPP1R13LQ8WUF5 828 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
SMPD4-208ENST00000439029 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
SMPD4-208ENST00000439029 NOB1Q9ULX3 412 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms