RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CDK5RAP2Q96SN8 1893 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 TLL1O43897 1013 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 ADAMTS4O75173 837 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 POU3F3P20264 500 aaPredicted RBP13.65□□□□□ -0.22
CSTF3-203ENST00000438862 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
CSTF3-203ENST00000438862 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
CSTF3-203ENST00000438862 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
CSTF3-203ENST00000438862 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
CSTF3-203ENST00000438862 FGBP02675 491 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 UQCRFS1P1P0C7P4 283 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 ACRP10323 421 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 CDK7P50613 346 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 TFCP2Q12800 502 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 PLS1Q14651 629 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 EHD4Q9H223 541 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 C11orf16Q9NQ32 467 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
CSTF3-203ENST00000438862 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 REV3LO60673 3130 aa13.64□□□□□ -0.23
CSTF3-203ENST00000438862 GBF1Q92538 1859 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 APBB1O00213 710 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
CSTF3-203ENST00000438862 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
CSTF3-203ENST00000438862 SLC25A27O95847 323 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 ZNF865P0CJ78 1059 aaPredicted RBP13.63□□□□□ -0.23
CSTF3-203ENST00000438862 KCNA10Q16322 511 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
CSTF3-203ENST00000438862 YBX2Q9Y2T7 364 aaKnown RBP13.63□□□□□ -0.23
CSTF3-203ENST00000438862 PI4K2BG5E9Z4 385 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 MCAMP43121 646 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 MRE11P49959 708 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
CSTF3-203ENST00000438862 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 CERS3Q8IU89 383 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
CSTF3-203ENST00000438862 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
CSTF3-203ENST00000438862 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 CHD7Q9P2D1 2997 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 MYH1P12882 1939 aa13.62□□□□□ -0.23
CSTF3-203ENST00000438862 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 ARVCFO00192 962 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 TAL1P17542 331 aaPredicted RBP13.61□□□□□ -0.23
CSTF3-203ENST00000438862 VTI1AQ96AJ9 217 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 MMP19Q99542 508 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
CSTF3-203ENST00000438862 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
CSTF3-203ENST00000438862 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
CSTF3-203ENST00000438862 CST5P28325 142 aaPredicted RBP13.6□□□□□ -0.23
CSTF3-203ENST00000438862 KCTD2Q14681 263 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 MSL3Q8N5Y2 521 aaKnown RBP13.6□□□□□ -0.23
CSTF3-203ENST00000438862 HLA-CQ95604 372 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 SPC25Q9HBM1 224 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 SLC4A7Q9Y6M7 1214 aa13.6□□□□□ -0.23
CSTF3-203ENST00000438862 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 FAM86C2PA6NEL3 165 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 PGK2P07205 417 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 ASGR1P07306 291 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 CYP2C18P33260 490 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 USP5P45974 858 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 OTOP2Q7RTS6 562 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 TRANK1O15050 2925 aa13.59□□□□□ -0.23
CSTF3-203ENST00000438862 PRRC2BQ5JSZ5 2229 aaKnown RBP13.58□□□□□ -0.24
CSTF3-203ENST00000438862 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 FLOT1O75955 427 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 CD4P01730 458 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 RABGGTBP53611 331 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 FOXK1P85037 733 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 SEPT2Q15019 361 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 RIOX2Q8IUF8 465 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
CSTF3-203ENST00000438862 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
CSTF3-203ENST00000438862 ATG4CQ96DT6 458 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
CSTF3-203ENST00000438862 ARHGAP33O14559 1287 aa13.57□□□□□ -0.24
CSTF3-203ENST00000438862 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms