RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 NEDD4P46934 1319 aa8.96□□□□□ -0.98
HMGB2-202ENST00000438704 ZNF646O15015 1829 aaPredicted RBP8.96□□□□□ -0.98
HMGB2-202ENST00000438704 MYH2Q9UKX2 1941 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 DDX60LQ5H9U9 1706 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 LAMB1P07942 1786 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 STX6O43752 255 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 DHX16O60231 1041 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 BAG4O95429 457 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 SLC3A2P08195 630 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 SYT1P21579 422 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 GJB2P29033 226 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 SCRN1Q12765 414 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 PKP1Q13835 747 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 GRIK5Q16478 980 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 C12orf60Q5U649 245 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 CYB5R4Q7L1T6 521 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 NSUN7Q8NE18 718 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 WHAMMQ8TF30 809 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 ZNF592Q92610 1267 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 ESR2Q92731 530 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 NOL10Q9BSC4 688 aaKnown RBP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 LY9Q9HBG7 655 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 AATFQ9NY61 560 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGB2-202ENST00000438704 ZSWIM5Q9P217 1185 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
HMGB2-202ENST00000438704 PSME4Q14997 1843 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 B4E1Z4 1266 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 USP17L12C9JPN9 530 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 USP17L21D6R901 530 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 ZSCAN22P10073 491 aaPredicted RBP8.94□□□□□ -0.98
HMGB2-202ENST00000438704 POLD1P28340 1107 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 MMP14P50281 582 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 MCCD1P59942 119 aaPredicted RBP8.94□□□□□ -0.98
HMGB2-202ENST00000438704 GTF2IP78347 998 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 FGD1P98174 961 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 APOBRQ0VD83 1088 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 SART3Q15020 963 aaKnown RBP8.94□□□□□ -0.98
HMGB2-202ENST00000438704 SEC23AQ15436 765 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 DACT2Q5SW24 774 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 KANK3Q6NY19 840 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 CERS5Q8N5B7 392 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 NECAB1Q8N987 351 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 ANKS1AQ92625 1134 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 MTMR6Q9Y217 621 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 DAGLAQ9Y4D2 1042 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 CD2APQ9Y5K6 639 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 ATP6V1DQ9Y5K8 247 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 FOCADQ5VW36 1801 aa8.94□□□□□ -0.98
HMGB2-202ENST00000438704 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 ECE2O60344 883 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 CTDNEP1O95476 244 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 DPEP1P16444 411 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 BTDP43251 543 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 ERVK-9P63128 1117 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 SKOR2Q2VWA4 1001 aaPredicted RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 CCDC178Q5BJE1 867 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 APOA5Q6Q788 366 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 TMEM87AQ8NBN3 555 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 SH3RF3Q8TEJ3 882 aaPredicted RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 SCARF2Q96GP6 870 aaPredicted RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 ZDHHC15Q96MV8 337 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 LRRC2Q9BYS8 371 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 TCP11L1Q9NUJ3 509 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 BRPF3Q9ULD4 1205 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 DNMT3AQ9Y6K1 912 aaPredicted RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 MYO3BQ8WXR4 1341 aa8.93□□□□□ -0.98
HMGB2-202ENST00000438704 BRCA1P38398 1863 aaKnown RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 BAZ2AQ9UIF9 1905 aaKnown RBP8.93□□□□□ -0.98
HMGB2-202ENST00000438704 SCN9AQ15858 1988 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 CDK5RAP2Q96SN8 1893 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 COL2A1P02458 1487 aaPredicted RBP8.92□□□□□ -0.98
HMGB2-202ENST00000438704 STK36Q9NRP7 1315 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 LTBP3Q9NS15 1303 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 KLF18A0A0U1RQI7 1052 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 USP17L3A6NCW0 530 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 USP17L4A6NCW7 530 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 SOCS7O14512 581 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 CDKL5O76039 1030 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 F13A1P00488 732 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 NOVP48745 357 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 MARSP56192 900 aaKnown RBP8.92□□□□□ -0.98
HMGB2-202ENST00000438704 MAP3K10Q02779 954 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 PDE4BQ07343 736 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 GAS6Q14393 721 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 TMEM67Q5HYA8 995 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 LARP1BQ659C4 914 aaKnown RBP8.92□□□□□ -0.98
HMGB2-202ENST00000438704 USP17L1Q7RTZ2 530 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 AMOTL1Q8IY63 956 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 ZNF837Q96EG3 531 aaPredicted RBP8.92□□□□□ -0.98
HMGB2-202ENST00000438704 MAP3K14Q99558 947 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 ZNF287Q9HBT7 754 aa8.92□□□□□ -0.98
HMGB2-202ENST00000438704 CUEDC1Q9NWM3 386 aaPredicted RBP8.92□□□□□ -0.98
HMGB2-202ENST00000438704 PIM2Q9P1W9 311 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms