RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CEP131Q9UPN4 1083 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 SRPRBQ9Y5M8 271 aaKnown RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 MORC2Q9Y6X9 1032 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 TRIM75PA6NK02 468 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 GSDMDP57764 484 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 HDLBPQ00341 1268 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 SYCP1Q15431 976 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 ARMCX5Q6P1M9 558 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 FBXO38Q6PIJ6 1188 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 NEDD1Q8NHV4 660 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 DPF2Q92785 391 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 COL4A5P29400 1685 aa15.8■□□□□ 0.12
PTCHD3-201ENST00000438700 SERPINC1P01008 464 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 GABPAQ06546 454 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 LARGE2Q8N3Y3 721 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 FANCLQ9NW38 375 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 POLD1P28340 1107 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 KIF5BP33176 963 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 PTPN14Q15678 1187 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 IMPACTQ9P2X3 320 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 HOOK1Q9UJC3 728 aaKnown RBP15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 SERPINA10Q9UK55 444 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 MAN1B1Q9UKM7 699 aa15.79■□□□□ 0.12
PTCHD3-201ENST00000438700 UBASH3AP57075 661 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 CFAP100Q494V2 611 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 ZFPM1Q8IX07 1006 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 LRRN4CLQ8ND94 238 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 CEP95Q96GE4 821 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 SERPINB13Q9UIV8 391 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 SFPQP23246 707 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 TCP10Q12799 353 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 R3HDM1Q15032 1099 aaKnown RBP15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 ZNF174Q15697 407 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 NPY5RQ15761 445 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 DHX58Q96C10 678 aa15.78■□□□□ 0.12
PTCHD3-201ENST00000438700 A0A087X0B3 334 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 RAD17O75943 681 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 TGFB2P61812 414 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 GRM4Q14833 912 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 TERF2Q15554 542 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 SMARCE1Q969G3 411 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 BRMS1Q9HCU9 246 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 ADAMTS3O15072 1205 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 HLA-DOAP06340 250 aa15.77■□□□□ 0.12
PTCHD3-201ENST00000438700 SIPA1L1O43166 1804 aa15.77■□□□□ 0.11
PTCHD3-201ENST00000438700 PLIN4Q96Q06 1357 aa15.77■□□□□ 0.11
PTCHD3-201ENST00000438700 ERICH4A6NGS2 130 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 AKR1B1P15121 316 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 CASP1P29466 404 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 AFMP43652 599 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 RASGRP2Q7LDG7 609 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 CCAR2Q8N163 923 aaKnown RBP15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 SYMPKQ92797 1274 aaKnown RBP15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 FAM198AQ9UFP1 575 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 MAD2L2Q9UI95 211 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 BRCA1P38398 1863 aaKnown RBP15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 SLURP2P0DP57 97 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 NLRP5P59047 1200 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 PIK3AP1Q6ZUJ8 805 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 CCDC150Q8NCX0 1101 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 IDI2Q9BXS1 227 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 ZNF446Q9NWS9 450 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 SWAP70Q9UH65 585 aa15.76■□□□□ 0.11
PTCHD3-201ENST00000438700 PSMD14O00487 310 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 SCG2P13521 617 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 SHMT1P34896 483 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 SOGA3Q5TF21 947 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 RSBN1LQ6PCB5 846 aaPredicted RBP15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 ZNF397Q8NF99 534 aaPredicted RBP15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 TNFRSF25Q93038 417 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 TDRD3Q9H7E2 651 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 TOP1P11387 765 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 GOLGA8FQ08AF8 430 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 GOLGA8DPQ0D2H9 430 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 TTC38Q5R3I4 469 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 KRT222Q8N1A0 295 aa15.75■□□□□ 0.11
PTCHD3-201ENST00000438700 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 SARSP49591 514 aaKnown RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 PTGDRQ13258 359 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 E4F1Q66K89 784 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 CLEC10AQ8IUN9 316 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 PRMT6Q96LA8 375 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms