RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 RPS6KB1P23443 525 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 PSMC4P43686 418 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 PLS1Q14651 629 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 ZNF654Q8IZM8 581 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 REPS2Q8NFH8 660 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 CHURC1Q8WUH1 139 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 PORCNQ9H237 461 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
SNRPB-202ENST00000438552 CCDC69A6NI79 296 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 PSMA5P28066 241 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 FCGRTP55899 365 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 SNAP25P60880 206 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 GPATCH4Q5T3I0 446 aaKnown RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 SYDE2Q5VT97 1194 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 OTOP1Q7RTM1 612 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 CTU1Q7Z7A3 348 aaKnown RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 CATIPQ7Z7H3 387 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 RAB11FIP4Q86YS3 637 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 SPATC1LQ9H0A9 340 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 ZNF214Q9UL59 606 aaPredicted RBP18.88■□□□□ 0.61
SNRPB-202ENST00000438552 PRR12Q9ULL5 1215 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 TRIM17Q9Y577 477 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 ZNF236Q9UL36 1845 aa18.88■□□□□ 0.61
SNRPB-202ENST00000438552 HTTP42858 3142 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 TNPO2O14787 897 aaKnown RBP18.87■□□□□ 0.61
SNRPB-202ENST00000438552 PLA2G6O60733 806 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 LIFRP42702 1097 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 TROAPQ12815 778 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 GRM4Q14833 912 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 MOV10L1Q9BXT6 1211 aaKnown RBP18.87■□□□□ 0.61
SNRPB-202ENST00000438552 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
SNRPB-202ENST00000438552 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
SNRPB-202ENST00000438552 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
SNRPB-202ENST00000438552 ZBED4O75132 1171 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 DDAH1O94760 285 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 RXRAP19793 462 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 ANAPC15P60006 121 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 CCNA1P78396 465 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 FGD1P98174 961 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 WDR78Q5VTH9 848 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 Q6ZUG5 572 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 RUFY3Q7L099 469 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 NUP133Q8WUM0 1156 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 TM6SF1Q9BZW5 370 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 UBA5Q9GZZ9 404 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 RAVER2Q9HCJ3 691 aaKnown RBP18.86■□□□□ 0.61
SNRPB-202ENST00000438552 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SNRPB-202ENST00000438552 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 MAPK4P31152 587 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 SNRNP48Q6IEG0 339 aaKnown RBP18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CCDC174Q6PII3 467 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 APOA5Q6Q788 366 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CCAR1Q8IX12 1150 aaKnown RBP18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CPXCR1Q8N123 301 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 TMTC2Q8N394 836 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CWC22Q9HCG8 908 aaKnown RBP18.85■□□□□ 0.61
SNRPB-202ENST00000438552 BRPF3Q9ULD4 1205 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
SNRPB-202ENST00000438552 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 PALM3A6NDB9 673 aaPredicted RBP18.84■□□□□ 0.61
SNRPB-202ENST00000438552 TAL1P17542 331 aaPredicted RBP18.84■□□□□ 0.61
SNRPB-202ENST00000438552 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 ARHGEF6Q15052 776 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 BRF1Q92994 677 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 TEX13BQ9BXU2 312 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 RANBP17Q9H2T7 1088 aaKnown RBP18.84■□□□□ 0.61
SNRPB-202ENST00000438552 GABRQQ9UN88 632 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 SLC12A7Q9Y666 1083 aa18.84■□□□□ 0.61
SNRPB-202ENST00000438552 ZNF536O15090 1300 aa18.83■□□□□ 0.61
SNRPB-202ENST00000438552 ZNFX1Q9P2E3 1918 aaKnown RBP18.83■□□□□ 0.6
SNRPB-202ENST00000438552 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 FDX1P10109 184 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 ERCC3P19447 782 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 STAT3P40763 770 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 PRKCZQ05513 592 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 GPR142Q7Z601 462 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 NCAPG2Q86XI2 1143 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 RIOX2Q8IUF8 465 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 SHCBP1Q8NEM2 672 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
SNRPB-202ENST00000438552 COA7Q96BR5 231 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 IL17RAQ96F46 866 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 SRRDQ9UH36 339 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 PLXNA1Q9UIW2 1896 aa18.83■□□□□ 0.6
SNRPB-202ENST00000438552 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
SNRPB-202ENST00000438552 ATP2A1O14983 1001 aa18.82■□□□□ 0.6
SNRPB-202ENST00000438552 DHX16O60231 1041 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms