RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 KLRC3Q07444 240 aa22.89■■□□□ 1.25
MUC1-211ENST00000438413 GIMAP6Q6P9H5 292 aa22.89■■□□□ 1.25
MUC1-211ENST00000438413 MSL3Q8N5Y2 521 aaKnown RBP22.89■■□□□ 1.25
MUC1-211ENST00000438413 KBTBD3Q8NAB2 608 aa22.89■■□□□ 1.25
MUC1-211ENST00000438413 CDX2Q99626 313 aaPredicted RBP22.89■■□□□ 1.25
MUC1-211ENST00000438413 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
MUC1-211ENST00000438413 PQBP1O60828 265 aaKnown RBP22.88■■□□□ 1.25
MUC1-211ENST00000438413 NDUFB10O96000 172 aa22.88■■□□□ 1.25
MUC1-211ENST00000438413 PRPF38AQ8NAV1 312 aaKnown RBP22.88■■□□□ 1.25
MUC1-211ENST00000438413 DDX11Q96FC9 970 aa22.88■■□□□ 1.25
MUC1-211ENST00000438413 COL25A1Q9BXS0 654 aaPredicted RBP22.88■■□□□ 1.25
MUC1-211ENST00000438413 SEMA6BQ9H3T3 888 aa22.88■■□□□ 1.25
MUC1-211ENST00000438413 RIPK3Q9Y572 518 aa22.88■■□□□ 1.25
MUC1-211ENST00000438413 SYNGAP1Q96PV0 1343 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 SYNRGQ9UMZ2 1314 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 RAG1P15918 1043 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 SLC4A3P48751 1232 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 APPBP2Q92624 585 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 OSBP2Q969R2 916 aa22.87■■□□□ 1.25
MUC1-211ENST00000438413 TSEN34Q9BSV6 310 aaKnown RBP22.87■■□□□ 1.25
MUC1-211ENST00000438413 DNAJC25-GNG10A0A024R161 153 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 KIAA0355O15063 1070 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 ACLYP53396 1101 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 C20orf194Q5TEA3 1177 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 MAMDC4Q6UXC1 1216 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 CPXCR1Q8N123 301 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 GPATCH3Q96I76 525 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 RNPC3Q96LT9 517 aaKnown RBP22.86■■□□□ 1.25
MUC1-211ENST00000438413 EPB41L4AQ9HCS5 686 aaPredicted RBP22.86■■□□□ 1.25
MUC1-211ENST00000438413 STARD7Q9NQZ5 370 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 TMEM39AQ9NV64 488 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 CLIP2Q9UDT6 1046 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 ZHX1Q9UKY1 873 aaPredicted RBP22.86■■□□□ 1.25
MUC1-211ENST00000438413 FAM184BQ9ULE4 1060 aa22.86■■□□□ 1.25
MUC1-211ENST00000438413 CTDP1Q9Y5B0 961 aaPredicted RBP22.86■■□□□ 1.25
MUC1-211ENST00000438413 IGKV6D-41A0A0C4DH26 115 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 ATP2A1O14983 1001 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 RNF113AO15541 343 aaKnown RBP22.85■■□□□ 1.25
MUC1-211ENST00000438413 GPAA1O43292 621 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 ZBED4O75132 1171 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 SNAI1O95863 264 aaPredicted RBP22.85■■□□□ 1.25
MUC1-211ENST00000438413 EPHB4P54760 987 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 ZNF444Q8N0Y2 327 aaPredicted RBP22.85■■□□□ 1.25
MUC1-211ENST00000438413 NUP133Q8WUM0 1156 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 TTYH1Q9H313 450 aaPredicted RBP22.85■■□□□ 1.25
MUC1-211ENST00000438413 MCM3APO60318 1980 aa22.85■■□□□ 1.25
MUC1-211ENST00000438413 MOXD2PA6NHM9 499 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 TDO2P48775 406 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 FPGSQ05932 587 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 FAAP100Q0VG06 881 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 TSHZ3Q63HK5 1081 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 ANKRD33Q7Z3H0 272 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 ZNF467Q7Z7K2 595 aaPredicted RBP22.84■■□□□ 1.25
MUC1-211ENST00000438413 KLHDC9Q8NEP7 349 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 KIFC2Q96AC6 838 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 TOX2Q96NM4 488 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 ZNF287Q9HBT7 754 aa22.84■■□□□ 1.25
MUC1-211ENST00000438413 RAVER2Q9HCJ3 691 aaKnown RBP22.84■■□□□ 1.25
MUC1-211ENST00000438413 EYSQ5T1H1 3165 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 DCDC2CA8MYV0 355 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 PRDM1O75626 825 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 ZFYP08048 801 aaPredicted RBP22.83■■□□□ 1.25
MUC1-211ENST00000438413 GNAT2P19087 354 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 MAFAQ8NHW3 353 aaPredicted RBP22.83■■□□□ 1.25
MUC1-211ENST00000438413 MYLIPQ8WY64 445 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 CEP95Q96GE4 821 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 SLC38A10Q9HBR0 1119 aa22.83■■□□□ 1.25
MUC1-211ENST00000438413 M0R2C6 588 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 DUSP11O75319 330 aaKnown RBP22.82■■□□□ 1.24
MUC1-211ENST00000438413 APPP05067 770 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 KCNA10Q16322 511 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 CCSAPQ6IQ19 270 aaPredicted RBP22.82■■□□□ 1.24
MUC1-211ENST00000438413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.82■■□□□ 1.24
MUC1-211ENST00000438413 ANKRD35Q8N283 1001 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 MKL1Q969V6 931 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.82■■□□□ 1.24
MUC1-211ENST00000438413 MTMR4Q9NYA4 1195 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 FEM1BQ9UK73 627 aa22.82■■□□□ 1.24
MUC1-211ENST00000438413 CDH23Q9H251 3354 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 MYADML2A6NDP7 307 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 TTLL1O95922 423 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 ACVR2BQ13705 512 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 LRRC47Q8N1G4 583 aaKnown RBP22.81■■□□□ 1.24
MUC1-211ENST00000438413 ABHD16BQ9H3Z7 469 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 DCTPP1Q9H773 170 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 FBXO40Q9UH90 709 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 SYNPO2Q9UMS6 1093 aa22.81■■□□□ 1.24
MUC1-211ENST00000438413 TMEM265A0A087WTH1 108 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 C6orf222P0C671 652 aaPredicted RBP22.8■■□□□ 1.24
MUC1-211ENST00000438413 CST5P28325 142 aaPredicted RBP22.8■■□□□ 1.24
MUC1-211ENST00000438413 IFNL3Q8IZI9 196 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 GMCL1P1Q8NEA9 526 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 CHST13Q8NET6 341 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 FGD4Q96M96 766 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 GLT1D1Q96MS3 346 aa22.8■■□□□ 1.24
MUC1-211ENST00000438413 PATL2C9JE40 543 aaKnown RBP22.79■■□□□ 1.24
MUC1-211ENST00000438413 ADCY6O43306 1168 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 FOSL2P15408 326 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 OAZ1P54368 228 aa22.79■■□□□ 1.24
MUC1-211ENST00000438413 IRX5P78411 483 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms