RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 PPIL2Q13356 520 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 TRIM29Q14134 588 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
LINC01007-202ENST00000437900 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 PIGSQ96S52 555 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 ZSCAN16Q9H4T2 348 aaPredicted RBP16.54■□□□□ 0.24
LINC01007-202ENST00000437900 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 KCNH4Q9UQ05 1017 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
LINC01007-202ENST00000437900 hCG_1642624A0A1W2PR95 340 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 KIF3CO14782 793 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 ZBTB5O15062 677 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
LINC01007-202ENST00000437900 MMP1P03956 469 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 SLC16A2P36021 539 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 C2orf69Q8N8R5 385 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 SHISA4Q96DD7 197 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
LINC01007-202ENST00000437900 PASKQ96RG2 1323 aa16.52■□□□□ 0.24
LINC01007-202ENST00000437900 HMGCS2P54868 508 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 RESTQ13127 1097 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 WWC2Q6AWC2 1192 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 VPS54Q9P1Q0 977 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.23
LINC01007-202ENST00000437900 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 STXBP3O00186 592 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 IRF6O14896 467 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 CST9Q5W186 159 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 ZNF408Q9H9D4 720 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
LINC01007-202ENST00000437900 PTPRFP10586 1907 aa16.51■□□□□ 0.23
LINC01007-202ENST00000437900 CALML3P27482 149 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 FOSBP53539 338 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 GUCY1B3Q02153 619 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 IKQ13123 557 aaPredicted RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 SAFBQ15424 915 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 NPY5RQ15761 445 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 OPTNQ96CV9 577 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
LINC01007-202ENST00000437900 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
LINC01007-202ENST00000437900 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
LINC01007-202ENST00000437900 FDX1P10109 184 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 TRAF1Q13077 416 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 SMC1BQ8NDV3 1235 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
LINC01007-202ENST00000437900 ZMYND12Q9H0C1 365 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
LINC01007-202ENST00000437900 DGKZQ13574 1117 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 FOXD4L5Q5VV16 416 aaPredicted RBP16.48■□□□□ 0.23
LINC01007-202ENST00000437900 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
LINC01007-202ENST00000437900 FOXD4L4Q8WXT5 416 aaPredicted RBP16.48■□□□□ 0.23
LINC01007-202ENST00000437900 GBP4Q96PP9 640 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
LINC01007-202ENST00000437900 GJA5P36382 358 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 NAPAP54920 295 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 MCTP1Q6DN14 999 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 AMNQ9BXJ7 453 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
LINC01007-202ENST00000437900 KIF28PB7ZC32 967 aa16.47■□□□□ 0.23
LINC01007-202ENST00000437900 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
LINC01007-202ENST00000437900 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms