RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 C16orf59Q7L2K0 433 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 AACSQ86V21 672 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 SIAH1Q8IUQ4 282 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 KLHDC9Q8NEP7 349 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 ADAMTS5Q9UNA0 930 aa16.97■□□□□ 0.31
LINC01088-201ENST00000437737 TCF20Q9UGU0 1960 aaKnown RBP16.97■□□□□ 0.31
LINC01088-201ENST00000437737 ELP1O95163 1332 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 MYADML2A6NDP7 307 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 VWA5AO00534 786 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.31
LINC01088-201ENST00000437737 ADGRE1Q14246 886 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 RASIP1Q5U651 963 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
LINC01088-201ENST00000437737 ZNF214Q9UL59 606 aaPredicted RBP16.96■□□□□ 0.31
LINC01088-201ENST00000437737 PPP1R9AQ9ULJ8 1098 aa16.96■□□□□ 0.31
LINC01088-201ENST00000437737 SUPT16HQ9Y5B9 1047 aaKnown RBP16.96■□□□□ 0.31
LINC01088-201ENST00000437737 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 TLR3O15455 904 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 DUSP11O75319 330 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 CCSAPQ6IQ19 270 aaPredicted RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 PCSK9Q8NBP7 692 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 MTIF3Q9H2K0 278 aaKnown RBP16.95■□□□□ 0.3
LINC01088-201ENST00000437737 NKX2-4Q9H2Z4 354 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 SPC25Q9HBM1 224 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 MCM3APO60318 1980 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
LINC01088-201ENST00000437737 SNAI1O95863 264 aaPredicted RBP16.94■□□□□ 0.3
LINC01088-201ENST00000437737 NEFLP07196 543 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 ASGR1P07306 291 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 CST5P28325 142 aaPredicted RBP16.94■□□□□ 0.3
LINC01088-201ENST00000437737 CDK7P50613 346 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 FAM83BQ5T0W9 1011 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 AMOTL1Q8IY63 956 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
LINC01088-201ENST00000437737 ARVCFO00192 962 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 IRX5P78411 483 aaPredicted RBP16.93■□□□□ 0.3
LINC01088-201ENST00000437737 SNRNP48Q6IEG0 339 aaKnown RBP16.93■□□□□ 0.3
LINC01088-201ENST00000437737 ERC1Q8IUD2 1116 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 MICALL1Q8N3F8 863 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
LINC01088-201ENST00000437737 IL23AQ9NPF7 189 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 NCOR1O75376 2440 aa16.93■□□□□ 0.3
LINC01088-201ENST00000437737 GOLIM4O00461 696 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 CYP2C18P33260 490 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 CDK8P49336 464 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 ACVR2BQ13705 512 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 GNASQ5JWF2 1037 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 NECAB3Q96P71 396 aaPredicted RBP16.92■□□□□ 0.3
LINC01088-201ENST00000437737 C1QTNF1Q9BXJ1 281 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 TEX13BQ9BXU2 312 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 KANSL2Q9H9L4 492 aa16.92■□□□□ 0.3
LINC01088-201ENST00000437737 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 PRKAB2O43741 272 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 FGBP02675 491 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
LINC01088-201ENST00000437737 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
LINC01088-201ENST00000437737 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
LINC01088-201ENST00000437737 CXXC1Q9P0U4 656 aaPredicted RBP16.91■□□□□ 0.3
LINC01088-201ENST00000437737 MBD4O95243 580 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 GJA9P57773 515 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 CCDC144BQ3MJ40 725 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
LINC01088-201ENST00000437737 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
LINC01088-201ENST00000437737 YBX2Q9Y2T7 364 aaKnown RBP16.9■□□□□ 0.3
LINC01088-201ENST00000437737 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
LINC01088-201ENST00000437737 DNAJC25-GNG10A0A024R161 153 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 SMIM22K7EJ46 135 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 ADCY6O43306 1168 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 SKIV2LQ15477 1246 aaKnown RBP16.89■□□□□ 0.29
LINC01088-201ENST00000437737 AAK1Q2M2I8 961 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 OTOP2Q7RTS6 562 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
LINC01088-201ENST00000437737 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.29
LINC01088-201ENST00000437737 HIPK3Q9H422 1215 aa16.89■□□□□ 0.29
LINC01088-201ENST00000437737 RIPK3Q9Y572 518 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms