RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 NSUN7Q8NE18 718 aaKnown RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 GMCL1P1Q8NEA9 526 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 ACER1Q8TDN7 264 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 DCAF4Q8WV16 495 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 PARK7Q99497 189 aaKnown RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 SLC26A6Q9BXS9 759 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 FRMPD2Q68DX3 1309 aaPredicted RBP12.15□□□□□ -0.46
LINC01039-201ENST00000437113 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 F5H6K3 240 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 JAK2O60674 1132 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 OSBPP22059 807 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 KLRC3Q07444 240 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
LINC01039-201ENST00000437113 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 TMTC3Q6ZXV5 915 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
LINC01039-201ENST00000437113 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L15C9J2P7 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L13C9JLJ4 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L11C9JVI0 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L18D6R9N7 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L22D6RA61 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L17D6RBQ6 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L19D6RCP7 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L20D6RJB6 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 NDUFB10O96000 172 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 IFNAR1P17181 557 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 PDCP20941 246 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 USP17L24Q0WX57 530 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 CMTR1Q8N1G2 835 aaKnown RBP12.14□□□□□ -0.47
LINC01039-201ENST00000437113 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
LINC01039-201ENST00000437113 WASF1Q92558 559 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 PHKBQ93100 1093 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 GMCL1Q96IK5 515 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 RBM27Q9P2N5 1060 aaKnown RBP12.14□□□□□ -0.47
LINC01039-201ENST00000437113 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
LINC01039-201ENST00000437113 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
LINC01039-201ENST00000437113 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 FOXN1O15353 648 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 TLR2O60603 784 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 DTNBO60941 627 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 DEXIO95424 95 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 TBC1D8O95759 1140 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 SNHG28P0DPA3 235 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 BMP3P12645 472 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 VCAM1P19320 739 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 FOSBP53539 338 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 IRX3P78415 501 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 CRHR2Q13324 411 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 TRIM29Q14134 588 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 TREML2Q5T2D2 321 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
LINC01039-201ENST00000437113 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 SEC63Q9UGP8 760 aaKnown RBP12.13□□□□□ -0.47
LINC01039-201ENST00000437113 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 H3BQV1 296 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 XBP1P17861 261 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 NTRK3Q16288 839 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 LARP1BQ659C4 914 aaKnown RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 PIBF1Q8WXW3 757 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 RRP36Q96EU6 259 aaKnown RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 ASCC2Q9H1I8 757 aaPredicted RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
LINC01039-201ENST00000437113 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
LINC01039-201ENST00000437113 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
LINC01039-201ENST00000437113 RLFQ13129 1914 aa12.11□□□□□ -0.47
LINC01039-201ENST00000437113 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms