RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 APOBEC3FQ8IUX4 373 aaKnown RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 CRACR2BQ8N4Y2 399 aaPredicted RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ENAHQ8N8S7 591 aaPredicted RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ARMC2Q8NEN0 867 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ZSCAN31Q96LW9 406 aaPredicted RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 UBAC1Q9BSL1 405 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 HERC5Q9UII4 1024 aaKnown RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 ANGEL1Q9UNK9 670 aaKnown RBP8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 TNKSO95271 1327 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 PITPNM2Q9BZ72 1349 aa8.25□□□□□ -1.09
LSM3P3-201ENST00000436601 SBF1O95248 1867 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 IGKV6D-41A0A0C4DH26 115 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 KLF18A0A0U1RQI7 1052 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 TSPY3P0CV98 308 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 TSPY8P0CW00 308 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 LSM11P83369 360 aaKnown RBP eCLIP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 WTAPQ15007 396 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 SHROOM1Q2M3G4 852 aaPredicted RBP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 NBPF12Q5TAG4 269 aaPredicted RBP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 PRAMEF18Q5VWM3 479 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 SGMS1Q86VZ5 419 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 IQCA1Q86XH1 822 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 NECAB1Q8N987 351 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 ZNF274Q96GC6 653 aaPredicted RBP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 CCDC17Q96LX7 622 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 TSR3Q9UJK0 312 aaKnown RBP8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 HPS5Q9UPZ3 1129 aa8.24□□□□□ -1.09
LSM3P3-201ENST00000436601 ERICH2A1L162 156 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 ADM5C9JUS6 153 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 PFKFB2O60825 505 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 GUCY1A2P33402 732 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 APLP1P51693 650 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 STK3Q13188 491 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 CERKLQ49MI3 558 aaPredicted RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 APOA5Q6Q788 366 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 SIAH1Q8IUQ4 282 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 TMTC2Q8N394 836 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 MARVELD3Q96A59 401 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 DCPSQ96C86 337 aaKnown RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 MYL10Q9BUA6 226 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 SH2B1Q9NRF2 756 aaPredicted RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 MTMR4Q9NYA4 1195 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 MAP10Q9P2G4 905 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 PPP2R3BQ9Y5P8 575 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 IVNS1ABPQ9Y6Y0 642 aa8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 DICER1Q9UPY3 1922 aaKnown RBP8.23□□□□□ -1.09
LSM3P3-201ENST00000436601 PLIN4Q96Q06 1357 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CCDC69A6NI79 296 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 DTNBO60941 627 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 GDF11O95390 407 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 VEGFAP15692 232 aaPredicted RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CCT2P78371 535 aaKnown RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 PTK2Q05397 1052 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 SCRN1Q12765 414 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 SEPT2Q15019 361 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 ABCB5Q2M3G0 1257 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 IFIT1BQ5T764 474 aaKnown RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 PDXDC2PQ6P474 469 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 USP48Q86UV5 1035 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 RAB11FIP4Q86YS3 637 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CCDC83Q8IWF9 413 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 ZNF654Q8IZM8 581 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 GTF3C6Q969F1 213 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 TMEM47Q9BQJ4 181 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 SLKQ9H2G2 1235 aaPredicted RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 NCOA5Q9HCD5 579 aaKnown RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 SLC12A7Q9Y666 1083 aa8.22□□□□□ -1.09
LSM3P3-201ENST00000436601 NAV1Q8NEY1 1877 aa8.21□□□□□ -1.09
LSM3P3-201ENST00000436601 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L5A8MUK1 530 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 PIK3CDO00329 1044 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 ZBTB43O43298 467 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 CTDNEP1O95476 244 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 GH2P01242 217 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 CCNYL3P0C7X3 344 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 SKIP12755 728 aa8.21□□□□□ -1.1
LSM3P3-201ENST00000436601 RXRAP19793 462 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms