RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 CYP21A2P08686 494 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 CYBAP13498 195 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 BMP8BP34820 402 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 MAGEA10P43363 369 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-204ENST00000436439 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 LPAR1Q92633 364 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 DDX20Q9UHI6 824 aaKnown RBP12.89□□□□□ -0.35
HMGCL-204ENST00000436439 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 FLOT1O75955 427 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
HMGCL-204ENST00000436439 PSMA5P28066 241 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 CNGA1P29973 690 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 PLS1Q14651 629 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
HMGCL-204ENST00000436439 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-204ENST00000436439 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
HMGCL-204ENST00000436439 NACAP1Q9BZK3 213 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 SMCHD1A6NHR9 2005 aa12.88□□□□□ -0.35
HMGCL-204ENST00000436439 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
HMGCL-204ENST00000436439 ST18O60284 1047 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-204ENST00000436439 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
HMGCL-204ENST00000436439 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-204ENST00000436439 ZNF213O14771 459 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 STRNO43815 780 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 APPP05067 770 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 NAPBQ9H115 298 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 ALDH8A1Q9H2A2 487 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-204ENST00000436439 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-204ENST00000436439 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
HMGCL-204ENST00000436439 MSCO60682 206 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
HMGCL-204ENST00000436439 RASA1P20936 1047 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 MCM2P49736 904 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 NEK4P51957 841 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-204ENST00000436439 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 MROH8Q9H579 483 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
HMGCL-204ENST00000436439 E7EWF7 191 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 DNM1LO00429 736 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 CASTP20810 708 aaKnown RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 TDO2P48775 406 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 MDM2Q00987 491 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 ABRAQ8N0Z2 381 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 TTC14Q96N46 770 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-204ENST00000436439 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
HMGCL-204ENST00000436439 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 VWA5AO00534 786 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 SEPT4O43236 478 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 RAD21O60216 631 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
HMGCL-204ENST00000436439 NBR1Q14596 966 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 BLOC1S2Q6QNY1 142 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 COL6A3P12111 3177 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 MCM3APO60318 1980 aa12.83□□□□□ -0.36
HMGCL-204ENST00000436439 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
HMGCL-204ENST00000436439 SLC25A27O95847 323 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 PGK2P07205 417 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 FCER1AP12319 257 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 NT5C2P49902 561 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 RTP1P59025 263 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 PPARAQ07869 468 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 LRIT3Q3SXY7 679 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms