RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 ESYT2A0FGR8 921 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 H7C1D1 291 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 STXBP3O00186 592 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 CASQ1P31415 396 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 GPSM2P81274 684 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 NONOQ15233 471 aaKnown RBP eCLIP17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 TMEM47Q9BQJ4 181 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 GAKO14976 1311 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 TAF1LQ8IZX4 1826 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 PLIN4Q96Q06 1357 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 C10orf71Q711Q0 1435 aa17.74■□□□□ 0.43
RBFOX1-205ENST00000436368 CDK8P49336 464 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 NAPAP54920 295 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 TUBB4BP68371 445 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 AMPD3Q01432 767 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 DIXDC1Q155Q3 683 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 MAPKAPK5Q8IW41 473 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 REXO1L1PQ8IX06 675 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 DYNLL2Q96FJ2 89 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 JAG2Q9Y219 1238 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
RBFOX1-205ENST00000436368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 KLRF2D3W0D1 207 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 M0R2N6 131 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 PSMA7O14818 248 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 ASPRV1Q53RT3 343 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 PPP1R18Q6NYC8 613 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 FAM114A1Q8IWE2 563 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 C4orf32Q8N8J7 132 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 GPKOWQ92917 476 aaPredicted RBP eCLIP17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 FLT1P17948 1338 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 TAF1P21675 1872 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 N4BP3O15049 544 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 MFAP3LO75121 409 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 SERPINB2P05120 415 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 EEF1GP26641 437 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 TMTC1Q8IUR5 882 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 NELFBQ8WX92 580 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 UBXN4Q92575 508 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
RBFOX1-205ENST00000436368 BICDL2A1A5D9 508 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 LRRC10BA6NIK2 292 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 EFCAB8A8MWE9 144 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 CD44P16070 742 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 PBX1P40424 430 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 IQCDQ96DY2 449 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 LRRC27Q9C0I9 530 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 THAP9Q9H5L6 903 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 SNED1Q8TER0 1413 aa17.71■□□□□ 0.43
RBFOX1-205ENST00000436368 KIF5CO60282 957 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 URI1O94763 535 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 STX17P56962 302 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 GNG11P61952 73 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 TSR1Q2NL82 804 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 HSP90AA4PQ58FG1 418 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 SMIM5Q71RC9 77 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 APTXQ7Z2E3 356 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 NEK8Q86SG6 692 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 STAG2Q8N3U4 1231 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 DHTKD1Q96HY7 919 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 COA1Q9GZY4 146 aa17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-205ENST00000436368 KCNJ18B7U540 433 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 WNT7AO00755 349 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 FECHP22830 423 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 KCNJ12Q14500 433 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 ELF2Q15723 593 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 INF2Q27J81 1249 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 TMEM266Q2M3C6 531 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 TCP11X2Q5H9J9 407 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 TRIM65Q6PJ69 517 aa17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 REXO1Q8N1G1 1221 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-205ENST00000436368 CALML4Q96GE6 196 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms