RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 DNAJC25-GNG10A0A024R161 153 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 ZBED4O75132 1171 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 ITGB8P26012 769 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 TLE2Q04725 743 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 SNX17Q15036 470 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 SHHQ15465 462 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 BADQ92934 168 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
PTPN7-203ENST00000435759 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
PTPN7-203ENST00000435759 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 RARBP10826 455 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 C9orf50Q5SZB4 431 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 FGD4Q96M96 766 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 NRBP1Q9UHY1 535 aa16.26■□□□□ 0.19
PTPN7-203ENST00000435759 SALL3Q9BXA9 1300 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 ERC2O15083 957 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 TTLL1O95922 423 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 SNAP25P60880 206 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 PPARAQ07869 468 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 IL17RBQ9NRM6 502 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 PRKAG2Q9UGJ0 569 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 FEM1BQ9UK73 627 aa16.25■□□□□ 0.19
PTPN7-203ENST00000435759 MYADML2A6NDP7 307 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 ADCY6O43306 1168 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 NMT2O60551 498 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 ADAMTS4O75173 837 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 BMP3P12645 472 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 MX1P20591 662 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 MCCP23508 829 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 COPB2P35606 906 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 GMCL1P1Q8NEA9 526 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 FAM161BQ96MY7 647 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 NACAP1Q9BZK3 213 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 NAPBQ9H115 298 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
PTPN7-203ENST00000435759 SMCHD1A6NHR9 2005 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 A0A1W2PQ45 241 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 A0A1W2PQY0 241 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 AKR1A1P14550 325 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 EPHB4P54760 987 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 RRP1P56182 461 aaKnown RBP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 CNTN2Q02246 1040 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 PDE4BQ07343 736 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 CCSAPQ6IQ19 270 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 RNF180Q86T96 592 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 KLHDC9Q8NEP7 349 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 HOMER2Q9NSB8 354 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 FAM184BQ9ULE4 1060 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 CTDP1Q9Y5B0 961 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
PTPN7-203ENST00000435759 ZNF236Q9UL36 1845 aa16.23■□□□□ 0.19
PTPN7-203ENST00000435759 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
PTPN7-203ENST00000435759 KCNA10Q16322 511 aa16.22■□□□□ 0.19
PTPN7-203ENST00000435759 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
PTPN7-203ENST00000435759 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
PTPN7-203ENST00000435759 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
PTPN7-203ENST00000435759 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-203ENST00000435759 STXBP5LQ9Y2K9 1186 aa16.22■□□□□ 0.19
PTPN7-203ENST00000435759 ZNF536O15090 1300 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 SYNGAP1Q96PV0 1343 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 ZNFX1Q9P2E3 1918 aaKnown RBP16.21■□□□□ 0.19
PTPN7-203ENST00000435759 UNC80Q8N2C7 3258 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 DLL1O00548 723 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 PQBP1O60828 265 aaKnown RBP16.21■□□□□ 0.19
PTPN7-203ENST00000435759 ACLYP53396 1101 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 KCTD1Q719H9 257 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 MSL3Q8N5Y2 521 aaKnown RBP16.21■□□□□ 0.19
PTPN7-203ENST00000435759 STAG1Q8WVM7 1258 aa16.21■□□□□ 0.19
PTPN7-203ENST00000435759 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-203ENST00000435759 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.19
PTPN7-203ENST00000435759 SYNRGQ9UMZ2 1314 aa16.2■□□□□ 0.18
PTPN7-203ENST00000435759 COL11A1P12107 1806 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-203ENST00000435759 FRMPD3Q5JV73 1810 aa16.2■□□□□ 0.18
PTPN7-203ENST00000435759 GREB1LQ9C091 1923 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-203ENST00000435759 SOWAHBA6NEL2 793 aa16.2■□□□□ 0.18
PTPN7-203ENST00000435759 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms