RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ZNF713Q8N859 430 aaPredicted RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 MASTLQ96GX5 879 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 C6orf50Q9HD87 102 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 SWAP70Q9UH65 585 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 PARP3Q9Y6F1 533 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 PSDA5PKW4 1024 aaPredicted RBP18.96■□□□□ 0.63
LIMK1-203ENST00000435201 USP27XA6NNY8 438 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 PICALMQ13492 652 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 TRMT44Q8IYL2 757 aaKnown RBP18.96■□□□□ 0.63
LIMK1-203ENST00000435201 CERS5Q8N5B7 392 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 MAP7D2Q96T17 732 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 SYNRGQ9UMZ2 1314 aa18.96■□□□□ 0.63
LIMK1-203ENST00000435201 PRPHP41219 470 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 CUL4BQ13620 913 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 HSP90AA2PQ14568 343 aaPredicted RBP18.95■□□□□ 0.62
LIMK1-203ENST00000435201 INF2Q27J81 1249 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 USP17L2Q6R6M4 530 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 HHIPL2Q6UWX4 724 aa18.95■□□□□ 0.62
LIMK1-203ENST00000435201 MTERF4Q7Z6M4 381 aaKnown RBP18.95■□□□□ 0.62
LIMK1-203ENST00000435201 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
LIMK1-203ENST00000435201 CCP110O43303 1012 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 ASPRV1Q53RT3 343 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 SOGA3Q5TF21 947 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 MED15Q96RN5 788 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 INTS13Q9NVM9 706 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 RMND1Q9NWS8 449 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 MTMR4Q9NYA4 1195 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 IGKV6D-41A0A0C4DH26 115 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 ESYT2A0FGR8 921 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 G3V3G9 751 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 MMP10P09238 476 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 DCAF8Q5TAQ9 597 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 RIOX1Q9H6W3 641 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 USP40Q9NVE5 1235 aa18.94■□□□□ 0.62
LIMK1-203ENST00000435201 SMCO2A6NFE2 343 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 APBA3O96018 575 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 PDHBP11177 359 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 CASP1P29466 404 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 STAT6P42226 847 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 ORC2Q13416 577 aaPredicted RBP18.93■□□□□ 0.62
LIMK1-203ENST00000435201 NONOQ15233 471 aaKnown RBP eCLIP18.93■□□□□ 0.62
LIMK1-203ENST00000435201 E4F1Q66K89 784 aaPredicted RBP18.93■□□□□ 0.62
LIMK1-203ENST00000435201 RASGRP2Q7LDG7 609 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 DISC1Q9NRI5 854 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 SERPINB13Q9UIV8 391 aa18.93■□□□□ 0.62
LIMK1-203ENST00000435201 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 PPP1R3GB7ZBB8 358 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 TUBB4AP04350 444 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 CD44P16070 742 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 TBX2Q13207 712 aaPredicted RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 DOK7Q18PE1 504 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 SPECC1LQ69YQ0 1117 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 CPVLQ9H3G5 476 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 TMX1Q9H3N1 280 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 DDX4Q9NQI0 724 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 SAMSN1Q9NSI8 373 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 TRMT1Q9NXH9 659 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 ADAMTSL1Q8N6G6 1762 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 A0A1B0GTH6 734 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 MYL1P05976 194 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 AKR1B1P15121 316 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 HSP90AA4PQ58FG1 418 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
LIMK1-203ENST00000435201 PODNQ7Z5L7 613 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 AK8Q96MA6 479 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 CTAGE1Q96RT6 745 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 PIGSQ96S52 555 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 CCSER1Q9C0I3 900 aa18.92■□□□□ 0.62
LIMK1-203ENST00000435201 GREB1LQ9C091 1923 aaPredicted RBP18.91■□□□□ 0.62
LIMK1-203ENST00000435201 TTLL1O95922 423 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 SEMA3FQ13275 785 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 NR1I3Q14994 352 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 CDKAL1Q5VV42 579 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 KLHL10Q6JEL2 608 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 PDCL3Q9H2J4 239 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 TMEM60Q9H2L4 133 aa18.91■□□□□ 0.62
LIMK1-203ENST00000435201 UBA7P41226 1012 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 KARSQ15046 597 aaKnown RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 ZNF658Q5TYW1 1059 aaPredicted RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 CDC42EP5Q6NZY7 148 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 NEK8Q86SG6 692 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 STAMQ92783 540 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 PPP1R13BQ96KQ4 1090 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 MTRQ99707 1265 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
LIMK1-203ENST00000435201 RPN1P04843 607 aaKnown RBP18.9■□□□□ 0.62
LIMK1-203ENST00000435201 OR52Z1P0C646 297 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms