RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	PCDHA8	Q9Y5H6	950 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	USP17L3	A6NCW0	530 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	USP17L4	A6NCW7	530 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	STXBP3	O00186	592 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RASA1	P20936	1047 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TXLNA	P40222	546 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SEMA3F	Q13275	785 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DIXDC1	Q155Q3	683 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	USP17L1	Q7RTZ2	530 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CERS3	Q8IU89	383 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CNGA4	Q8IV77	575 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	LZTS2	Q9BRK4	669 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MKNK2	Q9HBH9	465 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DISC1	Q9NRI5	854 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ANKIB1	Q9P2G1	1089 aa		18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DDX60L	Q5H9U9	1706 aa	Known RBP	18.17	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	NPHP1	O15259	732 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	LDHC	P07864	332 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TPM1	P09493	284 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	NFIX	Q14938	502 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SLC4A8	Q2Y0W8	1093 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RASGRP2	Q7LDG7	609 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ZNF804A	Q7Z570	1209 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RASGRP4	Q8TDF6	673 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	NELFB	Q8WX92	580 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCSER1	Q9C0I3	900 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SNED1	Q8TER0	1413 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCDC194	A0A1B0GVG4	234 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	LAD1	O00515	517 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MYL1	P05976	194 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TSPY3	P0CV98	308 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TSPY8	P0CW00	308 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PRPH	P41219	470 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	STAT6	P42226	847 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	FXR1	P51114	621 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	COPB1	P53618	953 aa	Known RBP	18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KCNB1	Q14721	858 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TCP11X2	Q5H9J9	407 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	AMOTL1	Q8IY63	956 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TMEM47	Q9BQJ4	181 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TMEM60	Q9H2L4	133 aa		18.16	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CASP14	P31944	242 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KARS	Q15046	597 aa	Known RBP	18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DTHD1	Q6ZMT9	781 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RSRC2	Q7L4I2	434 aa	Known RBP	18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SLC44A5	Q8NCS7	719 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TGFBRAP1	Q8WUH2	860 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SPZ1	Q9BXG8	430 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PRCP	P42785	496 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TRIM14	Q14142	442 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ADSSL1	Q8N142	457 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KBTBD4	Q9NVX7	518 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	FHOD1	Q9Y613	1164 aa		18.15	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KCNJ18	B7U540	433 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145		H7C1D1	291 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	KLRC4	O43908	158 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CDC25A	P30304	524 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CCT6A	P40227	531 aa	Known RBP	18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	KCNJ12	Q14500	433 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	BMS1	Q14692	1282 aa	Known RBP	18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	IRF2BP1	Q8IU81	584 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	NGLY1	Q96IV0	654 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	ZMYND12	Q9H0C1	365 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	GDA	Q9Y2T3	454 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CDK5RAP2	Q96SN8	1893 aa		18.14	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	GPR75-ASB3	A0A0A6YYF3	556 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	N4BP3	O15049	544 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	NOV	P48745	357 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	PPP2R3A	Q06190	1150 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	INF2	Q27J81	1249 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	C16orf86	Q6ZW13	317 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CPLX3	Q8WVH0	158 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	C8orf37	Q96NL8	207 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	COBL	O75128	1261 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	HEATR3	Q7Z4Q2	680 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	TMTC1	Q8IUR5	882 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CNBD1	Q8NA66	436 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	ANKRD20A12P	Q8NF67	263 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	NEDD1	Q8NHV4	660 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	ZNF287	Q9HBT7	754 aa		18.13	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	FLT1	P17948	1338 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	RHOBTB3	O94955	611 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	IL1R1	P14778	569 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	SMARCA1	P28370	1054 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	RFC4	P35249	363 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CRY2	Q49AN0	593 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	TRAPPC3L	Q5T215	181 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	MAPKAPK5	Q8IW41	473 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	GPR161	Q8N6U8	529 aa	Known RBP	18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	CERK	Q8TCT0	537 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	ABHD10	Q9NUJ1	306 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	TAB2	Q9NYJ8	693 aa		18.12	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	PP2D1	A8MPX8	630 aa		18.11	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	KLRF2	D3W0D1	207 aa		18.11	■□□□□ 0.49
HLA-DQB2-231	ENST00000435145	RNF225	M0QZC1	329 aa	Predicted RBP	18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms