RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 HAUS7Q99871 368 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 SLF1Q9BQI6 1058 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 UNC80Q8N2C7 3258 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 MOXD2PA6NHM9 499 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 SNAI1O95863 264 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 KLHDC9Q8NEP7 349 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 VTI1AQ96AJ9 217 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-207ENST00000435083 MYH7P12883 1935 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 TIMP1P01033 207 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 MS4A1P11836 297 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 ZSCAN25Q6NSZ9 544 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 CPXCR1Q8N123 301 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 PUS7LQ9H0K6 701 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 MKNK2Q9HBH9 465 aa13.91□□□□□ -0.18
CHRNA1-207ENST00000435083 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 MYADML2A6NDP7 307 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 F5H6K3 240 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 ZBED4O75132 1171 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 DUSP11O75319 330 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 C6orf222P0C671 652 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 IRX5P78411 483 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 KLRC3Q07444 240 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 PRPF38AQ8NAV1 312 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 PRDM6Q9NQX0 595 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 ARPP21Q9UBL0 812 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
CHRNA1-207ENST00000435083 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 NDUFB10O96000 172 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 RASA1P20936 1047 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 MAMDC4Q6UXC1 1216 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 TIFAQ96CG3 184 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 NYAP2Q9P242 653 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
CHRNA1-207ENST00000435083 MINDY4BA8MYZ0 360 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ASGR1P07306 291 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ANKRD35Q8N283 1001 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 PPM1EQ8WY54 764 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 KIFC2Q96AC6 838 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 DDX19BQ9UMR2 479 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ELP1O95163 1332 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 MROH7Q68CQ1 1323 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 CDK7P50613 346 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 TJAP1Q5JTD0 557 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 TMEM240Q5SV17 173 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 ABHD16BQ9H3Z7 469 aa13.88□□□□□ -0.19
CHRNA1-207ENST00000435083 A0A0U1RQG5 324 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 ARVCFO00192 962 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 ADCY6O43306 1168 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 ACRP10323 421 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 CSF2RAP15509 400 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 CST5P28325 142 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 PBX2P40425 430 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 GNASQ5JWF2 1037 aa13.87□□□□□ -0.19
CHRNA1-207ENST00000435083 MCM3APO60318 1980 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 SMARCA5O60264 1052 aaPredicted RBP13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 GJA9P57773 515 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 ARMCX2Q7L311 632 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 ZNF444Q8N0Y2 327 aaPredicted RBP13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
CHRNA1-207ENST00000435083 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms