RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NOD2Q9HC29 1040 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CAPN6Q9Y6Q1 641 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PAFAH1B1P43034 410 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 SCTRP47872 440 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 KLK7P49862 253 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 SLC39A6Q13433 755 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 LMBR1LQ6UX01 489 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 TMCO5BA8MYB1 307 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 HGSO14964 777 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 ZBTB43O43298 467 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PSMD2Q13200 908 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 NBPF20Q3BBV1 942 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CAPRIN2Q6IMN6 1127 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 COPS6Q7L5N1 327 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CREG2Q8IUH2 290 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 ZNF594Q96JF6 807 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 ZNHIT6Q9NWK9 470 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 KDRP35968 1356 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 GOLGA6L10A6NI86 522 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 KRT83P78385 493 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GRIK3Q13003 919 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 MB21D2Q8IYB1 491 aaPredicted RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 TRIML1Q8N9V2 468 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 XAGE3Q8WTP9 111 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ATP6V0A4Q9HBG4 840 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GLI1P08151 1106 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 RBM5P52756 815 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 HVCN1Q96D96 273 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PAGE5Q96GU1 130 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GDAQ9Y2T3 454 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 METP08581 1390 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 RANBP6O60518 1105 aaKnown RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 HEXIM1O94992 359 aaKnown RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PLEKP08567 350 aaPredicted RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 SLC8A1P32418 973 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GCKRQ14397 625 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PTPROQ16827 1216 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ZFYVE27Q5T4F4 411 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PI16Q6UXB8 463 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 KDM7AQ6ZMT4 941 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GGT7Q9UJ14 662 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 CYLC1P35663 651 aaPredicted RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ANKRD20A8PQ5CZ79 823 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 TLDC1Q6P9B6 456 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 EMBQ6PCB8 327 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 WDR59Q6PJI9 974 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 CYB5R4Q7L1T6 521 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 CACNA2D3Q8IZS8 1091 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 NELFBQ8WX92 580 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ZCWPW1Q9H0M4 648 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ANGEL1Q9UNK9 670 aaKnown RBP8.29□□□□□ -1.08
CPSF6-202ENST00000435070 A0A087WZG4 1122 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 FAM237AA0A1B0GTK4 181 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GMNCA6NCL1 334 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 BUB1O43683 1085 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 CDKL5O76039 1030 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 GNPTABQ3T906 1256 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 HAUS3Q68CZ6 603 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 SEC16BQ96JE7 1060 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 SNX12Q9UMY4 172 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 DIAPH2O60879 1101 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ANP32DO95626 131 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 ATF3P18847 181 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 PLAAQ9Y263 795 aa8.29□□□□□ -1.08
CPSF6-202ENST00000435070 KLHL33A6NCF5 533 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 SSRP1Q08945 709 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 ACTR5Q9H9F9 607 aaPredicted RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 NHEJ1Q9H9Q4 299 aaPredicted RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 RBBP5Q15291 538 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 SPA17Q15506 151 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 FAM133BQ5BKY9 247 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 TCP11X2Q5H9J9 407 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 YTHDF3Q7Z739 585 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 CCDC50Q8IVM0 306 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 KLHL7Q8IXQ5 586 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 SYMPKQ92797 1274 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 ATP6V1G3Q96LB4 118 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 PUS7LQ9H0K6 701 aaKnown RBP8.28□□□□□ -1.08
CPSF6-202ENST00000435070 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 UBN2Q6ZU65 1347 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 MYH10P35580 1976 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 ALKQ9UM73 1620 aa8.28□□□□□ -1.08
CPSF6-202ENST00000435070 TACC1O75410 805 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms