RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 A0A0G2JMZ2 1700 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 STK36Q9NRP7 1315 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 MANSC4A6NHS7 340 aaPredicted RBP26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 RASSF10A6NK89 507 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 SLC16A2P36021 539 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 HMGN5P82970 282 aaKnown RBP26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 SSRP1Q08945 709 aaKnown RBP26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 FUT2Q10981 343 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 PABPC4Q13310 644 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 MOGSQ13724 837 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 TREML2Q5T2D2 321 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 SYDE2Q5VT97 1194 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 NBPF11Q86T75 865 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 PHKBQ93100 1093 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 RNF26Q9BY78 433 aaPredicted RBP26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 RIOX1Q9H6W3 641 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 SMC3Q9UQE7 1217 aa26.92■■□□□ 1.9
SMARCAL1-208ENST00000434435 FAM155AB1AL88 458 aaPredicted RBP26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 CYTH3O43739 400 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 JAK2O60674 1132 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 FLOT1O75955 427 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 FMNL1O95466 1100 aaPredicted RBP26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 AKAP17AQ02040 695 aaKnown RBP26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 DEFB115Q30KQ5 88 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 CATSPERGQ6ZRH7 1159 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 SMARCC2Q8TAQ2 1214 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 IPO9Q96P70 1041 aaKnown RBP26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 SLF1Q9BQI6 1058 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 SLC26A6Q9BXS9 759 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 FOXD4L1Q9NU39 408 aa26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 RBM27Q9P2N5 1060 aaKnown RBP26.91■■□□□ 1.9
SMARCAL1-208ENST00000434435 SLC4A3P48751 1232 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 SLC35G1Q2M3R5 365 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 ADGRF4Q8IZF3 695 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 KIFC2Q96AC6 838 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 FBXO28Q9NVF7 368 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 PRR12Q9ULL5 1215 aa26.9■■□□□ 1.9
SMARCAL1-208ENST00000434435 HOXA7P31268 230 aaPredicted RBP26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 CYP4F22Q6NT55 531 aa26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 PRPF38AQ8NAV1 312 aaKnown RBP26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 SPRYD3Q8NCJ5 442 aa26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 BRI3BPQ8WY22 251 aa26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 RRP36Q96EU6 259 aaKnown RBP26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 VAT1LQ9HCJ6 419 aa26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 ORC3Q9UBD5 711 aaPredicted RBP26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 PPP1R9AQ9ULJ8 1098 aa26.89■■□□□ 1.9
SMARCAL1-208ENST00000434435 MYPNQ86TC9 1320 aa26.89■■□□□ 1.89
SMARCAL1-208ENST00000434435 PRPF3O43395 683 aaKnown RBP26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 PPFIA3O75145 1194 aa26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 IRX3P78415 501 aaPredicted RBP26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 GPAT2Q6NUI2 795 aa26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 SAMD1Q6SPF0 538 aaPredicted RBP26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 DDX11Q96FC9 970 aa26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 JMJD4Q9H9V9 463 aa26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 SEC63Q9UGP8 760 aaKnown RBP26.88■■□□□ 1.89
SMARCAL1-208ENST00000434435 TESPA1A2RU30 521 aaPredicted RBP26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 DTNBO60941 627 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 DEXIO95424 95 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 GJB2P29033 226 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 GRM1Q13255 1194 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 ANKRD23Q86SG2 305 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 HOMER1Q86YM7 354 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 PIBF1Q8WXW3 757 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 MTMR8Q96EF0 704 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 PNMA3Q9UL41 463 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 SLC45A1Q9Y2W3 748 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 KIF3AQ9Y496 699 aa26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 V9GY48 417 aaPredicted RBP26.87■■□□□ 1.89
SMARCAL1-208ENST00000434435 OSBPP22059 807 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 SREBF2Q12772 1141 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 COG2Q14746 738 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 FAM184AQ8NB25 1140 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 WASF1Q92558 559 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 CAPNS2Q96L46 248 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 PIGSQ96S52 555 aa26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 RBBP6Q7Z6E9 1792 aaKnown RBP26.86■■□□□ 1.89
SMARCAL1-208ENST00000434435 BTBD19C9JJ37 291 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 FDX1P10109 184 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 DSG3P32926 999 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 INHBEP58166 350 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 NOGQ13253 232 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 CDC37Q16543 378 aaPredicted RBP26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 ASCC2Q9H1I8 757 aaPredicted RBP26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 SMCHD1A6NHR9 2005 aa26.85■■□□□ 1.89
SMARCAL1-208ENST00000434435 THSD7BQ9C0I4 1608 aa26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 hCG_1642624A0A1W2PR95 340 aa26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 ATG4CQ96DT6 458 aa26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 RANBP17Q9H2T7 1088 aaKnown RBP26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 HOXC10Q9NYD6 342 aa26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 CTDP1Q9Y5B0 961 aaPredicted RBP26.84■■□□□ 1.89
SMARCAL1-208ENST00000434435 SPDYE16A6NNV3 312 aaPredicted RBP26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 PDHXO00330 501 aa26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 ZBTB5O15062 677 aa26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 SCG2P13521 617 aa26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 FDPSP14324 419 aaKnown RBP26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 PFKFB3Q16875 520 aaPredicted RBP26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 ZCCHC17Q9NP64 241 aaKnown RBP26.83■■□□□ 1.89
SMARCAL1-208ENST00000434435 PNMA6FA0A0J9YX94 578 aa26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 ZBED4O75132 1171 aa26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 PKN1Q16512 942 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms