RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 SKOR1P84550 965 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 TYRO3Q06418 890 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 Q6ZUG5 572 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 C8orf76Q96K31 380 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 PRC1O43663 620 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 HSPA4P34932 840 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 KRT9P35527 623 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 POLE2P56282 527 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 LONRF1Q17RB8 773 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 KIAA1958Q8N8K9 716 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 P3H4Q92791 437 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 C8orf48Q96LL4 319 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 TCF12Q99081 682 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 DRC3Q9H069 523 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 TEX14Q8IWB6 1497 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 CUL7Q14999 1698 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 SPDYE5A6NIY4 337 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 GNAI3P08754 354 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 GNGT1P63211 74 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 LACTB2Q53H82 288 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 HOMER1Q86YM7 354 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 SPERTQ8NA61 448 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 DQX1Q8TE96 717 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 FGD4Q96M96 766 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 UROC1Q96N76 676 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 HAUS2Q9NVX0 235 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 WDR33Q9C0J8 1336 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 A0A0B4J203 849 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 TSPAN1O60635 241 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 CDC45O75419 566 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 FBXO21O94952 628 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 GKAP1Q5VSY0 366 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 OSTM1Q86WC4 334 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 AZIN2Q96A70 460 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 SEMA4AQ9H3S1 761 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 TCF7L2Q9NQB0 619 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 TYW1Q9NV66 732 aaKnown RBP12.08□□□□□ -0.48
CCDC171-202ENST00000432954 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
CCDC171-202ENST00000432954 KRT14P02533 472 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 PIK3CAP42336 1068 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 PDE6CP51160 858 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 ELF3P78545 371 aaPredicted RBP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 STIM1Q13586 685 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 CUL4AQ13619 759 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 CRY1Q16526 586 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 CCAR1Q8IX12 1150 aaKnown RBP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
CCDC171-202ENST00000432954 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC171-202ENST00000432954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
CCDC171-202ENST00000432954 MAP3K13O43283 966 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 ZNF202O95125 648 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 PORP16435 677 aaPredicted RBP12.06□□□□□ -0.48
CCDC171-202ENST00000432954 CDC25CP30307 473 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
CCDC171-202ENST00000432954 GRAMD4Q6IC98 578 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 NLRP9Q7RTR0 991 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 PALB2Q86YC2 1186 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 SCAIQ8N9R8 606 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 CLMNQ96JQ2 1002 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 C1orf74Q96LT6 269 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 SIL1Q9H173 461 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 ABCF3Q9NUQ8 709 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 TBCCD1Q9NVR7 557 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 RMND1Q9NWS8 449 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 XPO7Q9UIA9 1087 aaKnown RBP12.06□□□□□ -0.48
CCDC171-202ENST00000432954 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 GSTA2P09210 222 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 ALADP13716 330 aa12.06□□□□□ -0.48
CCDC171-202ENST00000432954 TUFMP49411 452 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms