RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
SEC13-212ENST00000432213 F5H6K3 240 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.32
SEC13-212ENST00000432213 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 PTGS1P23219 599 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 TLE2Q04725 743 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 KLRC3Q07444 240 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
SEC13-212ENST00000432213 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
SEC13-212ENST00000432213 SLF1Q9BQI6 1058 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
SEC13-212ENST00000432213 CDH23Q9H251 3354 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 DNAJC25-GNG10A0A024R161 153 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
SEC13-212ENST00000432213 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 RAVER2Q9HCJ3 691 aaKnown RBP17.01■□□□□ 0.31
SEC13-212ENST00000432213 INCENPQ9NQS7 918 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 CLIP2Q9UDT6 1046 aa17.01■□□□□ 0.31
SEC13-212ENST00000432213 SYNRGQ9UMZ2 1314 aa17■□□□□ 0.31
SEC13-212ENST00000432213 SLC4A3P48751 1232 aa17■□□□□ 0.31
SEC13-212ENST00000432213 KCTD2Q14681 263 aa17■□□□□ 0.31
SEC13-212ENST00000432213 CPXCR1Q8N123 301 aa17■□□□□ 0.31
SEC13-212ENST00000432213 DDRGK1Q96HY6 314 aa17■□□□□ 0.31
SEC13-212ENST00000432213 TTYH1Q9H313 450 aaPredicted RBP17■□□□□ 0.31
SEC13-212ENST00000432213 SLC5A4Q9NY91 659 aa17■□□□□ 0.31
SEC13-212ENST00000432213 PLIN4Q96Q06 1357 aa17■□□□□ 0.31
SEC13-212ENST00000432213 RARBP10826 455 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
SEC13-212ENST00000432213 CCDC129Q6ZRS4 1044 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
SEC13-212ENST00000432213 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
SEC13-212ENST00000432213 ASTN1O14525 1302 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 PQBP1O60828 265 aaKnown RBP16.98■□□□□ 0.31
SEC13-212ENST00000432213 TDO2P48775 406 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 SLC38A10Q9HBR0 1119 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 MTMR4Q9NYA4 1195 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
SEC13-212ENST00000432213 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 CTAGE5O15320 804 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 NMT2O60551 498 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 AKR1A1P14550 325 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 SNAP25P60880 206 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 CNTN2Q02246 1040 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 FAM109BQ6ICB4 259 aaPredicted RBP16.97■□□□□ 0.31
SEC13-212ENST00000432213 KLHDC9Q8NEP7 349 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 KATNBL1Q9H079 304 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
SEC13-212ENST00000432213 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
SEC13-212ENST00000432213 ZNF536O15090 1300 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 APPP05067 770 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 CLTBP09497 229 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 ACLYP53396 1101 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 PRPF38AQ8NAV1 312 aaKnown RBP16.96■□□□□ 0.31
SEC13-212ENST00000432213 MKL1Q969V6 931 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 CDX2Q99626 313 aaPredicted RBP16.96■□□□□ 0.31
SEC13-212ENST00000432213 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.31
SEC13-212ENST00000432213 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.3
SEC13-212ENST00000432213 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
SEC13-212ENST00000432213 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
SEC13-212ENST00000432213 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 KCNA10Q16322 511 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 ZMYM1Q5SVZ6 1142 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEC13-212ENST00000432213 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 NEDD1Q8NHV4 660 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 AGBL1Q96MI9 1066 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 COL25A1Q9BXS0 654 aaPredicted RBP16.95■□□□□ 0.3
SEC13-212ENST00000432213 CHMP4BQ9H444 224 aaKnown RBP16.95■□□□□ 0.3
SEC13-212ENST00000432213 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
SEC13-212ENST00000432213 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
SEC13-212ENST00000432213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEC13-212ENST00000432213 PPARAQ07869 468 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 RNF180Q86T96 592 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 PURBQ96QR8 312 aaKnown RBP16.94■□□□□ 0.3
SEC13-212ENST00000432213 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 CNPY2Q9Y2B0 182 aa16.94■□□□□ 0.3
SEC13-212ENST00000432213 SOWAHBA6NEL2 793 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms