RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 RSBN1LQ6PCB5 846 aaPredicted RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 FAM177A1Q8N128 213 aaPredicted RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 SYMPKQ92797 1274 aaKnown RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 ZMYND12Q9H0C1 365 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 A0A087X0B3 334 aa22.31■■□□□ 1.16
VRK2-205ENST00000432057 PRR29P0C7W0 189 aa22.31■■□□□ 1.16
VRK2-205ENST00000432057 MDM2Q00987 491 aaPredicted RBP22.31■■□□□ 1.16
VRK2-205ENST00000432057 ELOA2Q8IYF1 753 aaPredicted RBP22.31■■□□□ 1.16
VRK2-205ENST00000432057 CCDC12Q8WUD4 166 aaPredicted RBP22.31■■□□□ 1.16
VRK2-205ENST00000432057 BPIFA3Q9BQP9 254 aa22.31■■□□□ 1.16
VRK2-205ENST00000432057 TRIM34Q9BYJ4 488 aa22.31■■□□□ 1.16
VRK2-205ENST00000432057 PSMD14O00487 310 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 ZBTB7AO95365 584 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 ZNF543Q08ER8 600 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 FOXP4Q8IVH2 680 aaPredicted RBP22.3■■□□□ 1.16
VRK2-205ENST00000432057 GRAMD1CQ8IYS0 662 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 ATRNL1Q5VV63 1379 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 COL2A1P02458 1487 aaPredicted RBP22.3■■□□□ 1.16
VRK2-205ENST00000432057 POSTNQ15063 836 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 INF2Q27J81 1249 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 CERKLQ49MI3 558 aaPredicted RBP22.3■■□□□ 1.16
VRK2-205ENST00000432057 SARM1Q6SZW1 724 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 ZNF830Q96NB3 372 aaPredicted RBP22.3■■□□□ 1.16
VRK2-205ENST00000432057 PCDHA5Q9Y5H7 936 aa22.3■■□□□ 1.16
VRK2-205ENST00000432057 SMCO2A6NFE2 343 aa22.29■■□□□ 1.16
VRK2-205ENST00000432057 IL17AQ16552 155 aa22.29■■□□□ 1.16
VRK2-205ENST00000432057 CCDC96Q2M329 555 aa22.29■■□□□ 1.16
VRK2-205ENST00000432057 DHX58Q96C10 678 aa22.29■■□□□ 1.16
VRK2-205ENST00000432057 C6orf50Q9HD87 102 aa22.29■■□□□ 1.16
VRK2-205ENST00000432057 HOOK1Q9UJC3 728 aaKnown RBP22.29■■□□□ 1.16
VRK2-205ENST00000432057 ENTPD3O75355 529 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 SOGA3Q5TF21 947 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 TATDN1Q6P1N9 297 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 C4orf32Q8N8J7 132 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 VIL1P09327 827 aaKnown RBP22.28■■□□□ 1.16
VRK2-205ENST00000432057 TTBK2Q6IQ55 1244 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 UPF1Q92900 1129 aaKnown RBP eCLIP22.28■■□□□ 1.16
VRK2-205ENST00000432057 GMLQ99445 158 aa22.28■■□□□ 1.16
VRK2-205ENST00000432057 TTC12Q9H892 705 aaPredicted RBP22.28■■□□□ 1.16
VRK2-205ENST00000432057 GDF11O95390 407 aa22.27■■□□□ 1.16
VRK2-205ENST00000432057 EEF2P13639 858 aaKnown RBP22.27■■□□□ 1.16
VRK2-205ENST00000432057 PPP4R3BQ5MIZ7 849 aa22.27■■□□□ 1.16
VRK2-205ENST00000432057 ZBTB12Q9Y330 459 aaPredicted RBP22.27■■□□□ 1.16
VRK2-205ENST00000432057 SPDYE2BA6NHP3 402 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 hCG_1984214I3L0E3 225 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 SPDYE6P0CI01 402 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 GNA11P29992 359 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 SEPT2Q15019 361 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 KCTD1Q719H9 257 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 KRT25Q7Z3Z0 450 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.26■■□□□ 1.15
VRK2-205ENST00000432057 ADGRF4Q8IZF3 695 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 ZNF713Q8N859 430 aaPredicted RBP22.26■■□□□ 1.15
VRK2-205ENST00000432057 COA7Q96BR5 231 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 JMJD4Q9H9V9 463 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 ESYT2A0FGR8 921 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 CLRN2A0PK11 232 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 GOLGA6L6A8MZA4 724 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 ARL6IP4Q66PJ3 421 aaKnown RBP22.26■■□□□ 1.15
VRK2-205ENST00000432057 KANK3Q6NY19 840 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 MAN1B1Q9UKM7 699 aa22.26■■□□□ 1.15
VRK2-205ENST00000432057 ATF5Q9Y2D1 282 aaPredicted RBP22.26■■□□□ 1.15
VRK2-205ENST00000432057 MYH7BA7E2Y1 1941 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 TCP10L2B9ZVM9 353 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 SLC16A2P36021 539 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 NCAPHQ15003 741 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
VRK2-205ENST00000432057 DRC7Q8IY82 874 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 TMEM60Q9H2L4 133 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 KANSL2Q9H9L4 492 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 TMOD2Q9NZR1 351 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 PIM2Q9P1W9 311 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 NYAP2Q9P242 653 aa22.25■■□□□ 1.15
VRK2-205ENST00000432057 RAD21O60216 631 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 ZNF500O60304 480 aaPredicted RBP22.24■■□□□ 1.15
VRK2-205ENST00000432057 BMP6P22004 513 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 CDC25BP30305 580 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 NONOQ15233 471 aaKnown RBP eCLIP22.24■■□□□ 1.15
VRK2-205ENST00000432057 NIM1KQ8IY84 436 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 SMARCE1Q969G3 411 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 CSRNP1Q96S65 589 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 HDAC9Q9UKV0 1011 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 SLFN14P0C7P3 912 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 ICA1Q05084 483 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 DLGAP5Q15398 846 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 ABCB5Q2M3G0 1257 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 NT5DC1Q5TFE4 455 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 TMEM179Q6ZVK1 233 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 REXO1Q8N1G1 1221 aaKnown RBP22.24■■□□□ 1.15
VRK2-205ENST00000432057 MKL1Q969V6 931 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 TMEM260Q9NX78 707 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 BIN2Q9UBW5 565 aaPredicted RBP22.24■■□□□ 1.15
VRK2-205ENST00000432057 ZNRF3Q9ULT6 936 aa22.24■■□□□ 1.15
VRK2-205ENST00000432057 PPP1R11O60927 126 aaPredicted RBP22.23■■□□□ 1.15
VRK2-205ENST00000432057 AFMP43652 599 aa22.23■■□□□ 1.15
VRK2-205ENST00000432057 SARSP49591 514 aaKnown RBP22.23■■□□□ 1.15
VRK2-205ENST00000432057 JAKMIP3Q5VZ66 844 aa22.23■■□□□ 1.15
VRK2-205ENST00000432057 MRFAP1L1Q96HT8 127 aa22.23■■□□□ 1.15
VRK2-205ENST00000432057 VPS33BQ9H267 617 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms