RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ME3Q16798 604 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 SYDE2Q5VT97 1194 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 GPAT2Q6NUI2 795 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
CHD4-202ENST00000430771 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
CHD4-202ENST00000430771 SPZ1Q9BXG8 430 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
CHD4-202ENST00000430771 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
CHD4-202ENST00000430771 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
CHD4-202ENST00000430771 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 IGF2BP3O00425 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHD4-202ENST00000430771 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 LARGE1O95461 756 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 DSG3P32926 999 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 TM4SF4P48230 202 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 SCRN1Q12765 414 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 COG2Q14746 738 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 SEC63Q9UGP8 760 aaKnown RBP12.78□□□□□ -0.36
CHD4-202ENST00000430771 PNMA2Q9UL42 364 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
CHD4-202ENST00000430771 PLEKHA8P1O95397 391 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 CDC27P30260 824 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 HERVK_113P62684 666 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 BECN1Q14457 450 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 TRIM22Q8IYM9 498 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 ZIC5Q96T25 663 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 PTPN18Q99952 460 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 FBXO28Q9NVF7 368 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 PRR12Q9ULL5 1215 aa12.77□□□□□ -0.37
CHD4-202ENST00000430771 ZBED4O75132 1171 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 IFNAR1P17181 557 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 SLC16A2P36021 539 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 OAZ1P54368 228 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 CCDC83Q8IWF9 413 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 RANBP17Q9H2T7 1088 aaKnown RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
CHD4-202ENST00000430771 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
CHD4-202ENST00000430771 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 VWA5AO00534 786 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 CYP2C8P10632 490 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 COPB2P35606 906 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 TRAF1Q13077 416 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 ADGRF4Q8IZF3 695 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
CHD4-202ENST00000430771 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.75□□□□□ -0.37
CHD4-202ENST00000430771 ADGRA2Q96PE1 1338 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 ZBTB5O15062 677 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 CA12O43570 354 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 CYTH3O43739 400 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
CHD4-202ENST00000430771 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
CHD4-202ENST00000430771 NTRK3Q16288 839 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 MTMR8Q96EF0 704 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
CHD4-202ENST00000430771 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 CFHR5Q9BXR6 569 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 SLC26A6Q9BXS9 759 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 TEX13BQ9BXU2 312 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 CPVLQ9H3G5 476 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms