RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 RAD21O60216 631 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 PTPREP23469 700 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 MMP14P50281 582 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 SEPT2Q15019 361 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 TYW1BQ6NUM6 668 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 MKL1Q969V6 931 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 MYOZ2Q9NPC6 264 aa16.36■□□□□ 0.21
CALD1-207ENST00000430085 FBXO2Q9UK22 296 aaPredicted RBP16.36■□□□□ 0.21
CALD1-207ENST00000430085 CCDC194A0A1B0GVG4 234 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 FZD9O00144 591 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 RPS12P25398 132 aaKnown RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 FAM13BQ9NYF5 915 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 SRPRBQ9Y5M8 271 aaKnown RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 ZNF541Q9H0D2 1346 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 GNA11P29992 359 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 ZNF174Q15697 407 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
CALD1-207ENST00000430085 ZMYND12Q9H0C1 365 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 HPSEQ9Y251 543 aa16.35■□□□□ 0.21
CALD1-207ENST00000430085 CNTNAP1P78357 1384 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 GH2P01242 217 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 DCAF4Q8WV16 495 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 TIGD1Q96MW7 591 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
CALD1-207ENST00000430085 SMCO2A6NFE2 343 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 M0R2N6 131 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 WNT10BO00744 389 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 ADAMTS3O15072 1205 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 SLC1A4P43007 532 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 ZRSR1Q15695 479 aaKnown RBP16.33■□□□□ 0.21
CALD1-207ENST00000430085 SLFN13Q68D06 897 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 KCTD1Q719H9 257 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 FERMT2Q96AC1 680 aa16.33■□□□□ 0.21
CALD1-207ENST00000430085 ZBED3Q96IU2 234 aaPredicted RBP16.33■□□□□ 0.21
CALD1-207ENST00000430085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.33■□□□□ 0.2
CALD1-207ENST00000430085 CAVIN2O95810 425 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 TNNI2P48788 182 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 STX1AQ16623 288 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 PPP1R9BQ96SB3 815 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
CALD1-207ENST00000430085 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
CALD1-207ENST00000430085 MCM7P33993 719 aa16.32■□□□□ 0.2
CALD1-207ENST00000430085 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
CALD1-207ENST00000430085 GRIN1Q05586 938 aa16.32■□□□□ 0.2
CALD1-207ENST00000430085 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
CALD1-207ENST00000430085 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
CALD1-207ENST00000430085 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
CALD1-207ENST00000430085 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 WNT7AO00755 349 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 SLC16A2P36021 539 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
CALD1-207ENST00000430085 PTGDRQ13258 359 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 KRT25Q7Z3Z0 450 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
CALD1-207ENST00000430085 CSRNP2Q9H175 543 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
CALD1-207ENST00000430085 F5H6K3 240 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 TBC1D12O60347 775 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 GMPSP49915 693 aaPredicted RBP16.3■□□□□ 0.2
CALD1-207ENST00000430085 ADCY7P51828 1080 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 JAG1P78504 1218 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 KLRC3Q07444 240 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 TNFAIP1Q13829 316 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
CALD1-207ENST00000430085 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 MICALL2Q8IY33 904 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 REXO1Q8N1G1 1221 aaKnown RBP16.3■□□□□ 0.2
CALD1-207ENST00000430085 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
CALD1-207ENST00000430085 COA7Q96BR5 231 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 HOOK1Q9UJC3 728 aaKnown RBP16.3■□□□□ 0.2
CALD1-207ENST00000430085 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
CALD1-207ENST00000430085 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
CALD1-207ENST00000430085 ZBTB5O15062 677 aa16.29■□□□□ 0.2
CALD1-207ENST00000430085 DDNO94850 711 aaPredicted RBP16.29■□□□□ 0.2
CALD1-207ENST00000430085 ZNF165P49910 485 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms