RNA–Protein interactions for RNA: ENST00000429978.5

GTDC1-210, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-210ENST00000429978 STRBPQ96SI9 672 aaKnown RBP18.47■□□□□ 0.55
GTDC1-210ENST00000429978 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
GTDC1-210ENST00000429978 MROH7Q68CQ1 1323 aa18.47■□□□□ 0.55
GTDC1-210ENST00000429978 PLIN4Q96Q06 1357 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 DUSP11O75319 330 aaKnown RBP18.46■□□□□ 0.55
GTDC1-210ENST00000429978 RASA1P20936 1047 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 ITGB8P26012 769 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 SLFNL1Q499Z3 407 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 MAFAQ8NHW3 353 aaPredicted RBP18.46■□□□□ 0.55
GTDC1-210ENST00000429978 LRRCC1Q9C099 1032 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 FAM184BQ9ULE4 1060 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 SYNRGQ9UMZ2 1314 aa18.46■□□□□ 0.55
GTDC1-210ENST00000429978 SMCHD1A6NHR9 2005 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 EYSQ5T1H1 3165 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
GTDC1-210ENST00000429978 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 PGK1P00558 417 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 FDX1P10109 184 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
GTDC1-210ENST00000429978 ACLYP53396 1101 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 FPGSQ05932 587 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 FAAP100Q0VG06 881 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 FAM161BQ96MY7 647 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 UPF3AQ9H1J1 476 aaKnown RBP18.45■□□□□ 0.54
GTDC1-210ENST00000429978 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 FBXO40Q9UH90 709 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
GTDC1-210ENST00000429978 VCANP13611 3396 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 F5H6K3 240 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 APBB1O00213 710 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 SNAI1O95863 264 aaPredicted RBP18.44■□□□□ 0.54
GTDC1-210ENST00000429978 ZFYP08048 801 aaPredicted RBP18.44■□□□□ 0.54
GTDC1-210ENST00000429978 RAG1P15918 1043 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 GNAT2P19087 354 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 KLRC3Q07444 240 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 GMCL1P1Q8NEA9 526 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 CHST13Q8NET6 341 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
GTDC1-210ENST00000429978 ABHD16BQ9H3Z7 469 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 SLC38A10Q9HBR0 1119 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 STARD7Q9NQZ5 370 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
GTDC1-210ENST00000429978 NDUFB10O96000 172 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 TIMP1P01033 207 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 CDK7P50613 346 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
GTDC1-210ENST00000429978 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
GTDC1-210ENST00000429978 APPBP2Q92624 585 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 TMEM39AQ9NV64 488 aa18.43■□□□□ 0.54
GTDC1-210ENST00000429978 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.42■□□□□ 0.54
GTDC1-210ENST00000429978 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.42■□□□□ 0.54
GTDC1-210ENST00000429978 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
GTDC1-210ENST00000429978 CHGBP05060 677 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 EPHB4P54760 987 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 GJA9P57773 515 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 RASIP1Q5U651 963 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 CCDC174Q6PII3 467 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
GTDC1-210ENST00000429978 PQBP1O60828 265 aaKnown RBP18.41■□□□□ 0.54
GTDC1-210ENST00000429978 ZBED4O75132 1171 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 ACVR2BQ13705 512 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 KCNA10Q16322 511 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 SYMPKQ92797 1274 aaKnown RBP18.41■□□□□ 0.54
GTDC1-210ENST00000429978 GLT1D1Q96MS3 346 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 MTMR4Q9NYA4 1195 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
GTDC1-210ENST00000429978 FOSL2P15408 326 aa18.4■□□□□ 0.54
GTDC1-210ENST00000429978 MYLIPQ8WY64 445 aa18.4■□□□□ 0.54
GTDC1-210ENST00000429978 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
GTDC1-210ENST00000429978 FGD4Q96M96 766 aa18.4■□□□□ 0.54
GTDC1-210ENST00000429978 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
GTDC1-210ENST00000429978 EPB41L4AQ9HCS5 686 aaPredicted RBP18.4■□□□□ 0.54
GTDC1-210ENST00000429978 PLA2G6O60733 806 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 TTLL1O95922 423 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 DNAJB2P25686 324 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 PPIGQ13427 754 aaKnown RBP eCLIP18.39■□□□□ 0.533e-6■■■■□ 24.1
GTDC1-210ENST00000429978 LRRFIP1Q32MZ4 808 aaKnown RBP18.39■□□□□ 0.53
GTDC1-210ENST00000429978 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
GTDC1-210ENST00000429978 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
GTDC1-210ENST00000429978 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
GTDC1-210ENST00000429978 PRUNE2Q8WUY3 3088 aa18.38■□□□□ 0.53
GTDC1-210ENST00000429978 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
GTDC1-210ENST00000429978 RNF113AO15541 343 aaKnown RBP18.38■□□□□ 0.53
GTDC1-210ENST00000429978 MIER1Q8N108 512 aa18.38■□□□□ 0.53
GTDC1-210ENST00000429978 SLC43A3Q8NBI5 491 aa18.38■□□□□ 0.53
GTDC1-210ENST00000429978 LENG1Q96BZ8 264 aaPredicted RBP18.38■□□□□ 0.53
GTDC1-210ENST00000429978 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
GTDC1-210ENST00000429978 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
GTDC1-210ENST00000429978 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
GTDC1-210ENST00000429978 ZHX1Q9UKY1 873 aaPredicted RBP18.38■□□□□ 0.53
GTDC1-210ENST00000429978 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms