RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 MLXIPQ9HAP2 919 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 GPR108Q9NPR9 543 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 FAM153AQ9UHL3 310 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 hCG_1642624A0A1W2PR95 340 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ZNF233A6NK53 670 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 E7EVH7 732 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ATP2C2O75185 946 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 GCFC2P16383 781 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 KRT83P78385 493 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 HAUS3Q68CZ6 603 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 NAIF1Q69YI7 327 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 AATFQ9NY61 560 aaKnown RBP eCLIP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 LRWD1Q9UFC0 647 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 RWDD2AQ9UIY3 292 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 NCK2O43639 380 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 PPP1R37O75864 691 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 CDR1P51861 262 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 WLSQ5T9L3 541 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 STIM2Q9P246 746 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 CEP131Q9UPN4 1083 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 BACH1O14867 736 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 SKAP2O75563 359 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 IFNAR1P17181 557 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 KCNA6P17658 529 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 NR1D1P20393 614 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 GUCY2FP51841 1108 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 SPAG1Q07617 926 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 KDM7AQ6ZMT4 941 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 ARHGAP23Q9P227 1491 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 MYH10P35580 1976 aa12.37□□□□□ -0.43
SEMA4D-209ENST00000429836 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 MOCS3O95396 460 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CARSP49589 748 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 ZNF174Q15697 407 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CFAP58Q5T655 872 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 WASF1Q92558 559 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 SHISA4Q96DD7 197 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 MTRQ99707 1265 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TACO1Q9BSH4 297 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 NFU1Q9UMS0 254 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 STK36Q9NRP7 1315 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 OPLAHO14841 1288 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 ZNF263O14978 683 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PLEKP08567 350 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PRCPP42785 496 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PMS1P54277 932 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 SNCBQ16143 134 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CCDC96Q2M329 555 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 EMBQ6PCB8 327 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CAPN11Q9UMQ6 739 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 B4DLN1 442 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 DNM1LO00429 736 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 KIF5AQ12840 1032 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 TPX2Q9ULW0 747 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-209ENST00000429836 BCL9LQ86UU0 1499 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 H7C1W4 665 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 ZPR1O75312 459 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 PRDM1O75626 825 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 DNA2P51530 1060 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms