RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 AKNAD1Q5T1N1 836 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
TRIM39-208ENST00000428555 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 KCTD1Q719H9 257 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 TRPV1Q8NER1 839 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
TRIM39-208ENST00000428555 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 MMP19Q99542 508 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 RAVER2Q9HCJ3 691 aaKnown RBP11.2□□□□□ -0.62
TRIM39-208ENST00000428555 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 OGDHLQ9ULD0 1010 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 CTDP1Q9Y5B0 961 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-208ENST00000428555 MGAMO43451 1857 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 H0YGN5 161 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 SLC1A4P43007 532 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 NOVP48745 357 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 KCTD2Q14681 263 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 NECAB2Q7Z6G3 386 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 TBC1D10CQ8IV04 446 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 TEX13BQ9BXU2 312 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 IL25Q9H293 177 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
TRIM39-208ENST00000428555 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 SNAP25P60880 206 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-208ENST00000428555 ZNF792Q3KQV3 632 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
TRIM39-208ENST00000428555 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-208ENST00000428555 PLXNB2O15031 1838 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 PLA2G6O60733 806 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 TOP1P11387 765 aaKnown RBP11.17□□□□□ -0.62
TRIM39-208ENST00000428555 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
TRIM39-208ENST00000428555 CHMLP26374 656 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 COPB2P35606 906 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 STAT2P52630 851 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 ANO1Q5XXA6 986 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 TTBK2Q6IQ55 1244 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 ESR2Q92731 530 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 TTC14Q96N46 770 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
TRIM39-208ENST00000428555 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
TRIM39-208ENST00000428555 NEDD4P46934 1319 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 RLFQ13129 1914 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 EVI5O60447 810 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 KDM4AO75164 1064 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 FDX1P10109 184 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 CYBAP13498 195 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 SLC16A2P36021 539 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 IMMTQ16891 758 aaKnown RBP11.16□□□□□ -0.62
TRIM39-208ENST00000428555 CCDC96Q2M329 555 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 CCDC174Q6PII3 467 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 TINF2Q9BSI4 451 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 C11orf49Q9H6J7 331 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 HOMER2Q9NSB8 354 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 DIS3Q9Y2L1 958 aaKnown RBP11.16□□□□□ -0.62
TRIM39-208ENST00000428555 NR2E3Q9Y5X4 410 aa11.16□□□□□ -0.62
TRIM39-208ENST00000428555 ZNF536O15090 1300 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 B4E1Z4 1266 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 TAL1P17542 331 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-208ENST00000428555 OAZ1P54368 228 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 PTH1RQ03431 593 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 SKAP1Q86WV1 359 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.62
TRIM39-208ENST00000428555 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
TRIM39-208ENST00000428555 RANBP2P49792 3224 aaKnown RBP11.14□□□□□ -0.63
TRIM39-208ENST00000428555 FRMPD2Q68DX3 1309 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-208ENST00000428555 GREB1LQ9C091 1923 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-208ENST00000428555 SEPT4O43236 478 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 MSCO60682 206 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 PDHBP11177 359 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 COL6A1P12109 1028 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 ALAS1P13196 640 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 GJC2Q5T442 439 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-208ENST00000428555 SYDE2Q5VT97 1194 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 BTNL9Q6UXG8 535 aa11.14□□□□□ -0.63
TRIM39-208ENST00000428555 DGKHQ86XP1 1220 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms