RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 NOC4LQ9BVI4 516 aaKnown RBP12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 PBX1P40424 430 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 MMS19Q96T76 1030 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 HPCAL4Q9UM19 191 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 ATP1A1P05023 1023 aaKnown RBP12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 GNGT1P63211 74 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 A0A1W2PQC6 194 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 LIG3P49916 1009 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
ATP2C1-204ENST00000428331 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 LRRC10BA6NIK2 292 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 RASGRF1Q13972 1273 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 IQCDQ96DY2 449 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 GDAQ9Y2T3 454 aa12.02□□□□□ -0.48
ATP2C1-204ENST00000428331 TCP1P17987 556 aaKnown RBP12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 CDR1P51861 262 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 ATP2C1P98194 919 aaPredicted RBP12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 CFAP58Q5T655 872 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 SH3RF1Q7Z6J0 888 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 CDK5RAP3Q96JB5 506 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 THAP9Q9H5L6 903 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 ARHGAP25P42331 645 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 PRCPP42785 496 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 ASIC1P78348 528 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 ZBED6P86452 979 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 TDRD12Q587J7 1177 aaKnown RBP12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 C8orf74Q6P047 294 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 MED15Q96RN5 788 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 MEGF6O75095 1541 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 MMS22LQ6ZRQ5 1243 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 GPATCH11Q8N954 259 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 SDR42E1Q8WUS8 393 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 RABEP2Q9H5N1 569 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 MMRN2Q9H8L6 949 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 MTMR7Q9Y216 660 aa12.02□□□□□ -0.49
ATP2C1-204ENST00000428331 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■■■■ 36.1
ATP2C1-204ENST00000428331 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 CCNI2Q6ZMN8 369 aaPredicted RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 ZEB2O60315 1214 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 SCG2P13521 617 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 CCDC152Q4G0S7 254 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 ARL6IP4Q66PJ3 421 aaKnown RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 FOXR1Q6PIV2 292 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 CERS3Q8IU89 383 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 PLIN2Q99541 437 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 NHEJ1Q9H9Q4 299 aaPredicted RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 B4DLN1 442 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 DDAH1O94760 285 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 PDE4DQ08499 809 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 CENPHQ9H3R5 247 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 HYOU1Q9Y4L1 999 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 MARCH6O60337 910 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 RIN2Q8WYP3 895 aaPredicted RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 TAF4BQ92750 862 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 SEC31BQ9NQW1 1179 aa12.01□□□□□ -0.49
ATP2C1-204ENST00000428331 SPEF2Q9C093 1822 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 MYL1P05976 194 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 EPHB4P54760 987 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 C2orf54Q08AI8 447 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 APTXQ7Z2E3 356 aaKnown RBP12□□□□□ -0.49
ATP2C1-204ENST00000428331 DHTKD1Q96HY7 919 aaPredicted RBP12□□□□□ -0.49
ATP2C1-204ENST00000428331 PNPLA7Q6ZV29 1317 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 A0A087X0B3 334 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 PLEKHA8P1O95397 391 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 MAGEA1P43355 309 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 GNAQP50148 359 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
ATP2C1-204ENST00000428331 IFT20Q8IY31 132 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 FAM169AQ9Y6X4 670 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 PCP11498 1178 aaKnown RBP12□□□□□ -0.49
ATP2C1-204ENST00000428331 AMPD2Q01433 879 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 CYP27A1Q02318 531 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
ATP2C1-204ENST00000428331 CALML4Q96GE6 196 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 HINFPQ9BQA5 517 aa12□□□□□ -0.49
ATP2C1-204ENST00000428331 AFDNP55196 1824 aaKnown RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 BCAMP50895 628 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 SPATS2Q86XZ4 545 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms