RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 GLT1D1Q96MS3 346 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 C1QTNF1Q9BXJ1 281 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 NKX2-4Q9H2Z4 354 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
RDH11-202ENST00000428130 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
RDH11-202ENST00000428130 ZNF214Q9UL59 606 aaPredicted RBP12.48□□□□□ -0.41
RDH11-202ENST00000428130 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 VWA5AO00534 786 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 ADCY6O43306 1168 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 SNAI1O95863 264 aaPredicted RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 ASGR1P07306 291 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 CYP2D6P10635 497 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 AKR1B1P15121 316 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 STAT3P40763 770 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 FAM126BQ8IXS8 530 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 HERVK_113Q902F9 699 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 IL23AQ9NPF7 189 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
RDH11-202ENST00000428130 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
RDH11-202ENST00000428130 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.41
RDH11-202ENST00000428130 ARVCFO00192 962 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 BCAR3O75815 825 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 C6orf222P0C671 652 aaPredicted RBP12.46□□□□□ -0.41
RDH11-202ENST00000428130 COPB2P35606 906 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
RDH11-202ENST00000428130 SLC28A3Q9HAS3 691 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
RDH11-202ENST00000428130 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
RDH11-202ENST00000428130 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
RDH11-202ENST00000428130 SCN5AQ14524 2016 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
RDH11-202ENST00000428130 APBB1O00213 710 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 CD4P01730 458 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 PDE6AP16499 860 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 CYP2C18P33260 490 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 TFF2Q03403 129 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
RDH11-202ENST00000428130 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
RDH11-202ENST00000428130 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
RDH11-202ENST00000428130 DNAJC25-GNG10A0A024R161 153 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
RDH11-202ENST00000428130 TLR3O15455 904 aaKnown RBP12.44□□□□□ -0.42
RDH11-202ENST00000428130 FGBP02675 491 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
RDH11-202ENST00000428130 KCNQ1P51787 676 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 GJA9P57773 515 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 VTI1AQ96AJ9 217 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 LRFN3Q9BTN0 628 aa12.44□□□□□ -0.42
RDH11-202ENST00000428130 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
RDH11-202ENST00000428130 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
RDH11-202ENST00000428130 UMODL1Q5DID0 1318 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 ZNF532Q9HCE3 1301 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 CTAGE5O15320 804 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
RDH11-202ENST00000428130 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 CCDC144BQ3MJ40 725 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
RDH11-202ENST00000428130 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
RDH11-202ENST00000428130 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
RDH11-202ENST00000428130 HCN4Q9Y3Q4 1203 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 RIPK3Q9Y572 518 aa12.43□□□□□ -0.42
RDH11-202ENST00000428130 TANC1Q9C0D5 1861 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 ERC2O15083 957 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 MYOGP15173 224 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 CDK8P49336 464 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 RABGGTBP53611 331 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 NKX3-2P78367 333 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 SNRNP48Q6IEG0 339 aaKnown RBP12.42□□□□□ -0.42
RDH11-202ENST00000428130 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 DDX11Q96FC9 970 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms