RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 LIG1P18858 919 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 CXCL9Q07325 125 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 TNMDQ9H2S6 317 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 SH2D4AQ9H788 454 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 CBX8Q9HC52 389 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 KLRF2D3W0D1 207 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 F8W031 263 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-204ENST00000427414 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 NFKBIEO00221 500 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-204ENST00000427414 EIF6P56537 245 aaKnown RBP9.73□□□□□ -0.85
SH3D19-204ENST00000427414 ZNF543Q08ER8 600 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 BTNL9Q6UXG8 535 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 CCDC34Q96HJ3 373 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 PRMT6Q96LA8 375 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-204ENST00000427414 SPON1Q9HCB6 807 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 CABP5Q9NP86 173 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 KCNQ5Q9NR82 932 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 ZNF277Q9NRM2 450 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-204ENST00000427414 PGAP2Q9UHJ9 254 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 HPSEQ9Y251 543 aa9.73□□□□□ -0.85
SH3D19-204ENST00000427414 NMT2O60551 498 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 AKR1B1P15121 316 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 RXRAP19793 462 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 PTPREP23469 700 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 ZNF75DP51815 510 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 RBM5P52756 815 aaKnown RBP eCLIP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 PICALMQ13492 652 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SF3A1Q15459 793 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 NPY5RQ15761 445 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CT47A1Q5JQC4 288 aaPredicted RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CEP135Q66GS9 1140 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 MXD3Q9BW11 206 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SEC63Q9UGP8 760 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 PCDHA7Q9UN72 937 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 STX8Q9UNK0 236 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SRPRBQ9Y5M8 271 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 GUCY1A2P33402 732 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 PRPHP41219 470 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 NFIAQ12857 509 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 TERF2Q15554 542 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 RESP18Q5W5W9 173 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SH3BP5LQ7L8J4 393 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CCAR1Q8IX12 1150 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 BLIDQ8IZY5 108 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SAMD3Q8N6K7 520 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 SLC44A5Q8NCS7 719 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CACTINQ8WUQ7 758 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 C6orf50Q9HD87 102 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 DACT1Q9NYF0 836 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
SH3D19-204ENST00000427414 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
SH3D19-204ENST00000427414 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 CCDC66A2RUB6 948 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 TRIM75PA6NK02 468 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 STXBP3O00186 592 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 ME1P48163 572 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 R3HDM1Q15032 1099 aaKnown RBP9.71□□□□□ -0.85
SH3D19-204ENST00000427414 ABCB5Q2M3G0 1257 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.85
SH3D19-204ENST00000427414 DNAJC18Q9H819 358 aa9.71□□□□□ -0.85
SH3D19-204ENST00000427414 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.85
SH3D19-204ENST00000427414 PITPNM2Q9BZ72 1349 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 DDTLA6NHG4 134 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 BTBD18B2RXH4 712 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 CDK11BP21127 795 aaKnown RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 NLRP5P59047 1200 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 EVX2Q03828 476 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 PLA2G4DQ86XP0 818 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 TDRD3Q9H7E2 651 aaKnown RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 MYOZ2Q9NPC6 264 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 CLIC4Q9Y696 253 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 V9GYY5 206 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-204ENST00000427414 EP400Q96L91 3159 aa9.71□□□□□ -0.86
SH3D19-204ENST00000427414 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF165P49910 485 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 GUCY1B3Q02153 619 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF397Q8NF99 534 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-204ENST00000427414 AIFM3Q96NN9 605 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 SBF1O95248 1867 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 CYTH3O43739 400 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 TOB1P50616 345 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-204ENST00000427414 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 RAB11FIP4Q86YS3 637 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms