RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 AKR1A1P14550 325 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 GNAT2P19087 354 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 COPB2P35606 906 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 SHHQ15465 462 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 RNF180Q86T96 592 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
HDLBP-213ENST00000427007 PRPF38AQ8NAV1 312 aaKnown RBP12.19□□□□□ -0.46
HDLBP-213ENST00000427007 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 TEX13BQ9BXU2 312 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 RAVER2Q9HCJ3 691 aaKnown RBP12.19□□□□□ -0.46
HDLBP-213ENST00000427007 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 PHF24Q9UPV7 400 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 CTDP1Q9Y5B0 961 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-213ENST00000427007 A0A1W2PQ45 241 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-213ENST00000427007 A0A1W2PQY0 241 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 TRIM43BA6NCK2 446 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
HDLBP-213ENST00000427007 ZBED4O75132 1171 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 TLE2Q04725 743 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-213ENST00000427007 TRIM43Q96BQ3 446 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-213ENST00000427007 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 ZHX1Q9UKY1 873 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-213ENST00000427007 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
HDLBP-213ENST00000427007 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 SYNRGQ9UMZ2 1314 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 PQBP1O60828 265 aaKnown RBP12.17□□□□□ -0.46
HDLBP-213ENST00000427007 ADAMTS4O75173 837 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 SNAI1O95863 264 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-213ENST00000427007 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 ITGB8P26012 769 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 GUCD1Q96NT3 240 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 ZNF287Q9HBT7 754 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
HDLBP-213ENST00000427007 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
HDLBP-213ENST00000427007 MCM3APO60318 1980 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 DNAJC25-GNG10A0A024R161 153 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 ATP2A1O14983 1001 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 ERC2O15083 957 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 TTLL1O95922 423 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 CLTBP09497 229 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-213ENST00000427007 TFAP4Q01664 338 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 PPARAQ07869 468 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
HDLBP-213ENST00000427007 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 ANKRD35Q8N283 1001 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 MKL1Q969V6 931 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 NAPBQ9H115 298 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 SLC38A10Q9HBR0 1119 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 TACC3Q9Y6A5 838 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
HDLBP-213ENST00000427007 LAMA2P24043 3122 aaKnown RBP12.15□□□□□ -0.46
HDLBP-213ENST00000427007 SYNGAP1Q96PV0 1343 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 ADCY6O43306 1168 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 BMP3P12645 472 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 ACLYP53396 1101 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 PDE4BQ07343 736 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-213ENST00000427007 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 MSL3Q8N5Y2 521 aaKnown RBP12.15□□□□□ -0.46
HDLBP-213ENST00000427007 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
HDLBP-213ENST00000427007 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-213ENST00000427007 SLC3A2P08195 630 aaKnown RBP12.14□□□□□ -0.47
HDLBP-213ENST00000427007 RAG1P15918 1043 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 MX1P20591 662 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 EPHB4P54760 987 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-213ENST00000427007 ACVR2BQ13705 512 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 KCNA10Q16322 511 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 CHST13Q8NET6 341 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 FGD4Q96M96 766 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 TSEN34Q9BSV6 310 aaKnown RBP12.14□□□□□ -0.47
HDLBP-213ENST00000427007 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 TMEM39AQ9NV64 488 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 FBXO40Q9UH90 709 aa12.14□□□□□ -0.47
HDLBP-213ENST00000427007 MOXD2PA6NHM9 499 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms