RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 A0A0G2JMZ2 1700 aa17.63■□□□□ 0.41
PDAP1-202ENST00000426447 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
PDAP1-202ENST00000426447 GRXCR1A8MXD5 290 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 SMIM22K7EJ46 135 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 DUSP11O75319 330 aaKnown RBP17.62■□□□□ 0.41
PDAP1-202ENST00000426447 SNAI1O95863 264 aaPredicted RBP17.62■□□□□ 0.41
PDAP1-202ENST00000426447 RLBP1P12271 317 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 CSF2RAP15509 400 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 PBX2P40425 430 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 TMEM240Q5SV17 173 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
PDAP1-202ENST00000426447 C16orf86Q6ZW13 317 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 IL27Q8NEV9 243 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 TEX13BQ9BXU2 312 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 PBX4Q9BYU1 374 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.412e-11■□□□□ 9.3
PDAP1-202ENST00000426447 TBX21Q9UL17 535 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 ELP1O95163 1332 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 SYNGAP1Q96PV0 1343 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 NAV1Q8NEY1 1877 aa17.62■□□□□ 0.41
PDAP1-202ENST00000426447 SPTBN5Q9NRC6 3674 aaKnown RBP17.62■□□□□ 0.41
PDAP1-202ENST00000426447 TLR3O15455 904 aaKnown RBP17.61■□□□□ 0.41
PDAP1-202ENST00000426447 ASGR1P07306 291 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 ACRP10323 421 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 IGFBP4P22692 258 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 ADD2P35612 726 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 ACVR2BQ13705 512 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 CCDC85BQ15834 202 aaPredicted RBP17.61■□□□□ 0.41
PDAP1-202ENST00000426447 SLFNL1Q499Z3 407 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 CCSAPQ6IQ19 270 aaPredicted RBP17.61■□□□□ 0.41
PDAP1-202ENST00000426447 ZNF365Q70YC5 407 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 C16orf59Q7L2K0 433 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 REPS2Q8NFH8 660 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 PPP1R12CQ9BZL4 782 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 PAG1Q9NWQ8 432 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 MSRAQ9UJ68 235 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 SLC4A4Q9Y6R1 1079 aa17.61■□□□□ 0.41
PDAP1-202ENST00000426447 SMCHD1A6NHR9 2005 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 CDH23Q9H251 3354 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
PDAP1-202ENST00000426447 MYADML2A6NDP7 307 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 CCER2I3L3R5 266 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 ZBED4O75132 1171 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 CDK7P50613 346 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 GNASQ5JWF2 1037 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 PSRC1Q6PGN9 363 aaPredicted RBP17.6■□□□□ 0.41
PDAP1-202ENST00000426447 MAMDC4Q6UXC1 1216 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 ANKRD35Q8N283 1001 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 PRPF38AQ8NAV1 312 aaKnown RBP17.6■□□□□ 0.41
PDAP1-202ENST00000426447 ASB2Q96Q27 587 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 NUP88Q99567 741 aaPredicted RBP17.6■□□□□ 0.41
PDAP1-202ENST00000426447 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 THEGQ9P2T0 379 aa17.6■□□□□ 0.41
PDAP1-202ENST00000426447 ARVCFO00192 962 aa17.59■□□□□ 0.41
PDAP1-202ENST00000426447 IRX5P78411 483 aaPredicted RBP17.59■□□□□ 0.41
PDAP1-202ENST00000426447 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
PDAP1-202ENST00000426447 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
PDAP1-202ENST00000426447 ABHD16BQ9H3Z7 469 aa17.59■□□□□ 0.41
PDAP1-202ENST00000426447 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.59■□□□□ 0.41
PDAP1-202ENST00000426447 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
PDAP1-202ENST00000426447 ZNFX1Q9P2E3 1918 aaKnown RBP17.59■□□□□ 0.41
PDAP1-202ENST00000426447 PRUNE2Q8WUY3 3088 aa17.58■□□□□ 0.41
PDAP1-202ENST00000426447 F5H6K3 240 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.4
PDAP1-202ENST00000426447 KLRC3Q07444 240 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 RAB30Q15771 203 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 ZNF467Q7Z7K2 595 aaPredicted RBP17.58■□□□□ 0.4
PDAP1-202ENST00000426447 STK11IPQ8N1F8 1099 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 ADAMTS19Q8TE59 1207 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 MTIF3Q9H2K0 278 aaKnown RBP17.58■□□□□ 0.4
PDAP1-202ENST00000426447 MKNK2Q9HBH9 465 aa17.58■□□□□ 0.4
PDAP1-202ENST00000426447 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 FGBP02675 491 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 CYP2C18P33260 490 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 GJA9P57773 515 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 RASIP1Q5U651 963 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
PDAP1-202ENST00000426447 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 TSPYL2Q9H2G4 693 aaPredicted RBP17.57■□□□□ 0.4
PDAP1-202ENST00000426447 SLC28A3Q9HAS3 691 aa17.57■□□□□ 0.4
PDAP1-202ENST00000426447 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
PDAP1-202ENST00000426447 HMMRO75330 724 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 ZSCAN25Q6NSZ9 544 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
PDAP1-202ENST00000426447 NKX2-4Q9H2Z4 354 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 IL23AQ9NPF7 189 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 FBXO40Q9UH90 709 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 RAPGEFL1Q9UHV5 662 aa17.56■□□□□ 0.4
PDAP1-202ENST00000426447 ATP2A1O14983 1001 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 NDUFB10O96000 172 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 ATP5JP18859 108 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 ADGRE1Q14246 886 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms