RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 CHMP4BP1P59074 171 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 LETM2Q2VYF4 491 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 GSPT2Q8IYD1 628 aaKnown RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 C10orf67Q8IYJ2 551 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 RNF41Q9H4P4 317 aaPredicted RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
USP42-203ENST00000426246 USP17L8P0C7I0 530 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
USP42-203ENST00000426246 CYP27A1Q02318 531 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 SMC1AQ14683 1233 aaKnown RBP15.1■□□□□ 0.01
USP42-203ENST00000426246 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
USP42-203ENST00000426246 CCDC66A2RUB6 948 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 DIXDC1Q155Q3 683 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 NTRK3Q16288 839 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 INF2Q27J81 1249 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 DUOX1Q9NRD9 1551 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 SLFN14P0C7P3 912 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 SF3A3Q12874 501 aaKnown RBP eCLIP15.1■□□□□ 0.01
USP42-203ENST00000426246 DYMQ7RTS9 669 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 ENAHQ8N8S7 591 aaPredicted RBP15.1■□□□□ 0.01
USP42-203ENST00000426246 PDE11AQ9HCR9 933 aa15.1■□□□□ 0.01
USP42-203ENST00000426246 TXLNAP40222 546 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 RAD9BQ6WBX8 426 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 CENPHQ9H3R5 247 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 MAGEC2Q9UBF1 373 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 IFNAR1P17181 557 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 MTIF2P46199 727 aaKnown RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 FXR1P51114 621 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP42-203ENST00000426246 ALX1Q15699 326 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 TC2NQ8N9U0 490 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 TBC1D7Q9P0N9 293 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 SEMA3EO15041 775 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 PPP6R2O75170 966 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 TTC19Q6DKK2 380 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 ZSCAN10Q96SZ4 725 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 DEF6Q9H4E7 631 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
USP42-203ENST00000426246 FBXO2Q9UK22 296 aaPredicted RBP15.09■□□□□ 0.01
USP42-203ENST00000426246 ADAMTS3O15072 1205 aa15.08■□□□□ 0
USP42-203ENST00000426246 FANCGO15287 622 aa15.08■□□□□ 0
USP42-203ENST00000426246 TFAP4Q01664 338 aa15.08■□□□□ 0
USP42-203ENST00000426246 PICALMQ13492 652 aa15.08■□□□□ 0
USP42-203ENST00000426246 C15orf52Q6ZUT6 534 aaKnown RBP15.08■□□□□ 0
USP42-203ENST00000426246 MAPKAPK5Q8IW41 473 aa15.08■□□□□ 0
USP42-203ENST00000426246 MLKLQ8NB16 471 aa15.08■□□□□ 0
USP42-203ENST00000426246 NELFBQ8WX92 580 aa15.08■□□□□ 0
USP42-203ENST00000426246 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
USP42-203ENST00000426246 GOLGA1Q92805 767 aa15.08■□□□□ 0
USP42-203ENST00000426246 PAGE5Q96GU1 130 aa15.08■□□□□ 0
USP42-203ENST00000426246 CHP1Q99653 195 aa15.08■□□□□ 0
USP42-203ENST00000426246 KAT14Q9H8E8 782 aa15.08■□□□□ 0
USP42-203ENST00000426246 IKBKBO14920 756 aa15.08■□□□□ 0
USP42-203ENST00000426246 PTPREP23469 700 aa15.08■□□□□ 0
USP42-203ENST00000426246 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
USP42-203ENST00000426246 RIOK1Q9BRS2 568 aaKnown RBP15.08■□□□□ 0
USP42-203ENST00000426246 HSD3B7Q9H2F3 369 aa15.08■□□□□ 0
USP42-203ENST00000426246 N4BP1O75113 896 aaKnown RBP15.07■□□□□ 0
USP42-203ENST00000426246 CXCR5P32302 372 aa15.07■□□□□ 0
USP42-203ENST00000426246 HNRNPH2P55795 449 aaKnown RBP15.07■□□□□ 0
USP42-203ENST00000426246 GOLGA6L1Q8N7Z2 621 aa15.07■□□□□ 0
USP42-203ENST00000426246 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
USP42-203ENST00000426246 PARP3Q9Y6F1 533 aa15.07■□□□□ 0
USP42-203ENST00000426246 GPSM2P81274 684 aa15.07■□□□□ 0
USP42-203ENST00000426246 GPS2Q13227 327 aa15.07■□□□□ 0
USP42-203ENST00000426246 UBA5Q9GZZ9 404 aa15.07■□□□□ 0
USP42-203ENST00000426246 CTAGE9A4FU28 777 aa15.07■□□□□ 0
USP42-203ENST00000426246 MYO1BO43795 1136 aa15.07■□□□□ 0
USP42-203ENST00000426246 KIF20AO95235 890 aa15.07■□□□□ 0
USP42-203ENST00000426246 CAPN2P17655 700 aa15.07■□□□□ 0
USP42-203ENST00000426246 HIBADHP31937 336 aaKnown RBP15.07■□□□□ 0
USP42-203ENST00000426246 XDHP47989 1333 aa15.07■□□□□ 0
USP42-203ENST00000426246 BAZ2AQ9UIF9 1905 aaKnown RBP15.07■□□□□ 0
USP42-203ENST00000426246 ASIC1P78348 528 aa15.06■□□□□ 0
USP42-203ENST00000426246 CCDC122Q5T0U0 273 aa15.06■□□□□ 0
USP42-203ENST00000426246 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
USP42-203ENST00000426246 LEMD3Q9Y2U8 911 aa15.06■□□□□ 0
USP42-203ENST00000426246 MORC2Q9Y6X9 1032 aaPredicted RBP15.06■□□□□ 0
USP42-203ENST00000426246 TRIM65Q6PJ69 517 aa15.06■□□□□ 0
USP42-203ENST00000426246 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
USP42-203ENST00000426246 GJA10Q969M2 543 aa15.06■□□□□ 0
USP42-203ENST00000426246 MMRN2Q9H8L6 949 aa15.06■□□□□ 0
USP42-203ENST00000426246 FAM207AQ9NSI2 230 aaPredicted RBP15.06■□□□□ 0
USP42-203ENST00000426246 RSPH14Q9UHP6 348 aa15.06■□□□□ 0
USP42-203ENST00000426246 IQUBQ8NA54 791 aa15.06■□□□□ 0
USP42-203ENST00000426246 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
USP42-203ENST00000426246 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
USP42-203ENST00000426246 NSUN4Q96CB9 384 aaKnown RBP15.06■□□□□ 0
USP42-203ENST00000426246 CRAMP1Q96RY5 1269 aa15.06■□□□□ 0
USP42-203ENST00000426246 LAMB1P07942 1786 aa15.06■□□□□ 0
USP42-203ENST00000426246 PLA2G4AP47712 749 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms