RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ANKS1AQ92625 1134 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CEP95Q96GE4 821 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CAPNS2Q96L46 248 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TM6SF1Q9BZW5 370 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KIAA1683Q9H0B3 1180 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 WDR33Q9C0J8 1336 aaKnown RBP8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ECE1P42892 770 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 BACE1P56817 501 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ANAPC15P60006 121 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TRDNQ13061 729 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KRT32Q14532 448 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MORN1Q5T089 497 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 IGDCC4Q8TDY8 1250 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 C12orf42Q96LP6 360 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TTC14Q96N46 770 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 NEK1Q96PY6 1258 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KIF2CQ99661 725 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PTPN18Q99952 460 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PRR14Q9BWN1 585 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TOMM22Q9NS69 142 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CLIP2Q9UDT6 1046 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CEP350Q5VT06 3117 aa8.32□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MANSC4A6NHS7 340 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 C19orf81C9J6K1 198 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 USP17L10C9JJH3 530 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 AOC2O75106 756 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TTLL1O95922 423 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 S1PR4O95977 384 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CPA1P15085 419 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MCM5P33992 734 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MAP2K2P36507 400 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TM4SF4P48230 202 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GTF2A2P52657 109 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KIF23Q02241 960 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ICA1Q05084 483 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 NOGQ13253 232 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SNAPC2Q13487 334 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GPAT2Q6NUI2 795 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CHST3Q7LGC8 479 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 DGKHQ86XP1 1220 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 BRI3BPQ8WY22 251 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZSCAN10Q96SZ4 725 aaPredicted RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZKSCAN3Q9BRR0 538 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SYNPO2Q9UMS6 1093 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MYH8P13535 1937 aa8.31□□□□□ -1.08
CHCHD3P1-201ENST00000425516 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PRC1O43663 620 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RPS6KB1P23443 525 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MCCP23508 829 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LIFRP42702 1097 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 INHBEP58166 350 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 DGKZQ13574 1117 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MTMR2Q13614 643 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 IQCA1Q86XH1 822 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TMEM87BQ96K49 555 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 JAKMIP1Q96N16 626 aaKnown RBP8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TBC1D32Q96NH3 1257 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 AGXT2Q9BYV1 514 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 C22orf23Q9BZE7 217 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 VCPKMTQ9H867 229 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LY9Q9HBG7 655 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TNKSO95271 1327 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PTPRFP10586 1907 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 BTBD19C9JJ37 291 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RNF223E7ERA6 249 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 F5H6K3 240 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SH2B2O14492 632 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 IFIT3O14879 490 aaKnown RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CETPP11597 493 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CASTP20810 708 aaKnown RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PSMA5P28066 241 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms