RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 KLRC3Q07444 240 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SBK1Q52WX2 424 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 KIAA1755Q5JYT7 1200 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ANKRD33Q7Z3H0 272 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SH3RF1Q7Z6J0 888 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CHST13Q8NET6 341 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CLIP2Q9UDT6 1046 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FEM1BQ9UK73 627 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TIMP1P01033 207 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZFYP08048 801 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 C6orf222P0C671 652 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZNF865P0CJ78 1059 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ACVR2BQ13705 512 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 KCNA10Q16322 511 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 GNASQ5JWF2 1037 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 IL27Q8NEV9 243 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 KIFC2Q96AC6 838 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 SEZ6LQ9BYH1 1024 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 FBXO28Q9NVF7 368 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZNF214Q9UL59 606 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ALPK3Q96L96 1907 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CYP2D7A0A087X1C5 515 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TDO2P48775 406 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 OAZ1P54368 228 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 PDE4BQ07343 736 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 MFSD5Q6N075 450 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CHURC1Q8WUH1 139 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ECHDC1Q9NTX5 307 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 MSRAQ9UJ68 235 aa14.63□□□□□ -0.07
HLA-DQB3-203ENST00000425319 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ATP2A1O14983 1001 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CABYRO75952 493 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 FAAP100Q0VG06 881 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 STK11IPQ8N1F8 1099 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ASB14A6NK59 587 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ARVCFO00192 962 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TTLL1O95922 423 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TSPY3P0CV98 308 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TSPY8P0CW00 308 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TAL1P17542 331 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 DNAJB2P25686 324 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 PSRC1Q6PGN9 363 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 FAM160B2Q86V87 743 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TIFAQ96CG3 184 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 STRBPQ96SI9 672 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 PUS7LQ9H0K6 701 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ZNF576Q9H609 170 aa14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB3-203ENST00000425319 PATL2C9JE40 543 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ADAMTS4O75173 837 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ASGR1P07306 291 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 BMP3P12645 472 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CST5P28325 142 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 EVX2Q03828 476 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 RAB30Q15771 203 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 RPUSD2Q8IZ73 545 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 KLHDC9Q8NEP7 349 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 APPBP2Q92624 585 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TTYH1Q9H313 450 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 SYNRGQ9UMZ2 1314 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ROBO3Q96MS0 1386 aa14.6□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ERC2O15083 957 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 NDUFB10O96000 172 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 FGBP02675 491 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 RASA1P20936 1047 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 GJA9P57773 515 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 CCDC144BQ3MJ40 725 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 TJAP1Q5JTD0 557 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 KBTBD3Q8NAB2 608 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 MKL1Q969V6 931 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 ACAD9Q9H845 621 aa14.59□□□□□ -0.07
HLA-DQB3-203ENST00000425319 DNAJC25-GNG10A0A024R161 153 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 STAT2P52630 851 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SLFNL1Q499Z3 407 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ARMCX2Q7L311 632 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 REPS2Q8NFH8 660 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SLC28A3Q9HAS3 691 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms