RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 SSC5DA1L4H1 1573 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 NDUFB10O96000 172 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
CALD1-206ENST00000424922 RIOX1Q9H6W3 641 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
CALD1-206ENST00000424922 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 POTECB2RU33 542 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 SLC16A2P36021 539 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 SAFBQ15424 915 aaKnown RBP eCLIP17.23■□□□□ 0.35
CALD1-206ENST00000424922 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 RRP36Q96EU6 259 aaKnown RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 WRNIP1Q96S55 665 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 TAF1DQ9H5J8 278 aaPredicted RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 SYNPO2Q9UMS6 1093 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 BRAPQ7Z569 592 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
CALD1-206ENST00000424922 PIGSQ96S52 555 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
CALD1-206ENST00000424922 MSNP26038 577 aaKnown RBP17.22■□□□□ 0.35
CALD1-206ENST00000424922 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.358e-8■□□□□ 10.4
CALD1-206ENST00000424922 PRKG1Q13976 671 aa17.22■□□□□ 0.35
CALD1-206ENST00000424922 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
CALD1-206ENST00000424922 ADGRF4Q8IZF3 695 aa17.22■□□□□ 0.35
CALD1-206ENST00000424922 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
CALD1-206ENST00000424922 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
CALD1-206ENST00000424922 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
CALD1-206ENST00000424922 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CALD1-206ENST00000424922 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
CALD1-206ENST00000424922 PHIPQ8WWQ0 1821 aa17.22■□□□□ 0.35
CALD1-206ENST00000424922 CCDC192P0DO97 292 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 LIG1P18858 919 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 RBM43Q6ZSC3 357 aaKnown RBP17.21■□□□□ 0.35
CALD1-206ENST00000424922 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 BMP3P12645 472 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
CALD1-206ENST00000424922 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
CALD1-206ENST00000424922 OXER1Q8TDS5 423 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
CALD1-206ENST00000424922 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 JMJD4Q9H9V9 463 aa17.21■□□□□ 0.35
CALD1-206ENST00000424922 OTOFQ9HC10 1997 aa17.21■□□□□ 0.34
CALD1-206ENST00000424922 NLRP5P59047 1200 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 NR5A1Q13285 461 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 SCYL3Q8IZE3 742 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 KLRG1Q96E93 195 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 FEZ1Q99689 392 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■□□□ 12.1
CALD1-206ENST00000424922 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
CALD1-206ENST00000424922 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
CALD1-206ENST00000424922 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 BARHL2Q9NY43 387 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
CALD1-206ENST00000424922 SMCHD1A6NHR9 2005 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 TMEM232C9JQI7 657 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 STXBP3O00186 592 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 KRT2P35908 639 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
CALD1-206ENST00000424922 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
CALD1-206ENST00000424922 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
CALD1-206ENST00000424922 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
CALD1-206ENST00000424922 NPY5RQ15761 445 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 BRMS1Q9HCU9 246 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 TNMDQ9H2S6 317 aa17.18■□□□□ 0.34
CALD1-206ENST00000424922 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
CALD1-206ENST00000424922 PTPRAP18433 802 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 NAPAP54920 295 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.17■□□□□ 0.34
CALD1-206ENST00000424922 CDCA5Q96FF9 252 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms