RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GJA8P48165 433 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 LMNB2Q03252 620 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 FAM160A1Q05DH4 1040 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 CNGB1Q14028 1251 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-205ENST00000424674 DHX8Q14562 1220 aaKnown RBP4.74□□□□□ -1.65
SF3B1-205ENST00000424674 VPS72Q15906 364 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 ZNF124Q15973 351 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 TMPRSS7Q7RTY8 843 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 SAMD3Q8N6K7 520 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 CCDC120Q96HB5 630 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 KIRREL1Q96J84 757 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 RHOVQ96L33 236 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
SF3B1-205ENST00000424674 SLC38A3Q99624 504 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 HOMER2Q9NSB8 354 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 C19orf73Q9NVV2 129 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 ZSWIM5Q9P217 1185 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 CORINQ9Y5Q5 1042 aa4.74□□□□□ -1.65
SF3B1-205ENST00000424674 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 CILPO75339 1184 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 PF4P02776 101 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 GLI1P08151 1106 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 ATF4P18848 351 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 PLCG1P19174 1290 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 GBP2P32456 591 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 MAN1A1P33908 653 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 GYS2P54840 703 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 EVA1CP58658 441 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 CAMK2GQ13555 558 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 HLTFQ14527 1009 aaKnown RBP eCLIP4.73□□□□□ -1.652e-14■□□□□ 8.9
SF3B1-205ENST00000424674 BRD3Q15059 726 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 MLANAQ16655 118 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 ZNF394Q53GI3 561 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 FYB2Q5VWT5 728 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 BNC2Q6ZN30 1099 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-205ENST00000424674 HS2ST1Q7LGA3 356 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 FAM13CQ8NE31 585 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 CYB5D2Q8WUJ1 264 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 PPM1EQ8WY54 764 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 APPBP2Q92624 585 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 IL17RAQ96F46 866 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 FAM84AQ96KN4 292 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 Q96M66 194 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 IER2Q9BTL4 223 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 SLAMF8Q9P0V8 285 aa4.73□□□□□ -1.65
SF3B1-205ENST00000424674 FAM221AA4D161 298 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 DBX1A6NMT0 343 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 IFRD1O00458 451 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 LDHAP00338 332 aaKnown RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 F13A1P00488 732 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 ESR1P03372 595 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 CD53P19397 219 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 GNALP38405 381 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 YARSP54577 528 aaKnown RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 RACK1P63244 317 aaKnown RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 MESP2Q0VG99 397 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 PWP1Q13610 501 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 MYBPC2Q14324 1141 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 MAP9Q49MG5 647 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 TMEM201Q5SNT2 666 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 ZNF280DQ6N043 979 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 FAM43BQ6ZT52 329 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 LRP10Q7Z4F1 713 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 BHLHE22Q8NFJ8 381 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 LIN37Q96GY3 246 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 APBA2Q99767 749 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 TRIT1Q9H3H1 467 aaKnown RBP4.72□□□□□ -1.65
SF3B1-205ENST00000424674 SFMBT1Q9UHJ3 866 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 ANAPC4Q9UJX5 808 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 TMEM59LQ9UK28 342 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 CEP131Q9UPN4 1083 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 PCDHGB7Q9Y5F8 929 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 EID1Q9Y6B2 187 aa4.72□□□□□ -1.65
SF3B1-205ENST00000424674 UPK3BL1B0FP48 263 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 UPK3BL2E5RIL1 263 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 TLR3O15455 904 aaKnown RBP4.71□□□□□ -1.66
SF3B1-205ENST00000424674 SSBP05455 408 aaKnown RBP eCLIP4.71□□□□□ -1.66
SF3B1-205ENST00000424674 KRT18P05783 430 aaKnown RBP4.71□□□□□ -1.66
SF3B1-205ENST00000424674 PTMAP06454 111 aaKnown RBP4.71□□□□□ -1.66
SF3B1-205ENST00000424674 RAC2P15153 192 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 EXOSC10Q01780 885 aaKnown RBP4.71□□□□□ -1.66
SF3B1-205ENST00000424674 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 PPP2R5AQ15172 486 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 TMEM67Q5HYA8 995 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 HOMER1Q86YM7 354 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 RELL1Q8IUW5 271 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 FBXO27Q8NI29 283 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 RNF141Q8WVD5 230 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 GPRASP2Q96D09 838 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 TMEM74Q96NL1 305 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 TRIM55Q9BYV6 548 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 TMX4Q9H1E5 349 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms