RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 SLIT2O94813 1529 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 A0A1W2PQJ5 194 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 SRGNP10124 158 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 PRLRP16471 622 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 CYLC1P35663 651 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 UBXN1Q04323 297 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 STIM1Q13586 685 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 CMTR1Q8N1G2 835 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 HELBQ8NG08 1087 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 VPS16Q9H269 839 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 TAB2Q9NYJ8 693 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 RRP15Q9Y3B9 282 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 KRT86O43790 486 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 CCT6AP40227 531 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 BCAMP50895 628 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 SMYD4Q8IYR2 804 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 NOA1Q8NC60 698 aaKnown RBP17.1■□□□□ 0.33
C9orf3-204ENST00000424143 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 RHOXF2Q9BQY4 288 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 TSGA10Q9BZW7 698 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
C9orf3-204ENST00000424143 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
C9orf3-204ENST00000424143 PRPHP41219 470 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 PRCPP42785 496 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 EVA1CP58658 441 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 IL17AQ16552 155 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-204ENST00000424143 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-204ENST00000424143 COG1Q8WTW3 980 aa17.09■□□□□ 0.33
C9orf3-204ENST00000424143 PHLPP1O60346 1717 aa17.08■□□□□ 0.33
C9orf3-204ENST00000424143 A6NNZ2 444 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 WNT7AO00755 349 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 CASP1P29466 404 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 HNRNPH3P31942 346 aaKnown RBP17.08■□□□□ 0.32
C9orf3-204ENST00000424143 KIF5BP33176 963 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 ZBED6P86452 979 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 FAM114A1Q8IWE2 563 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
C9orf3-204ENST00000424143 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 CHP1Q99653 195 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 FAM107BQ9H098 131 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 KBTBD4Q9NVX7 518 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 ZNHIT6Q9NWK9 470 aaKnown RBP17.08■□□□□ 0.32
C9orf3-204ENST00000424143 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
C9orf3-204ENST00000424143 A0A1B0GUL6 1792 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 LAMB1P07942 1786 aa17.08■□□□□ 0.32
C9orf3-204ENST00000424143 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-204ENST00000424143 PSMA7O14818 248 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 RGL2O15211 777 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 MAGEA9P43362 315 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 NLRP5P59047 1200 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 HERVK_113P62684 666 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 MMGT1Q8N4V1 131 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 DISC1Q9NRI5 854 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-204ENST00000424143 HPCAL4Q9UM19 191 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 KLRC4O43908 158 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 SHOX2O60902 331 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-204ENST00000424143 PRDM1O75626 825 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 SYF2O95926 243 aaKnown RBP17.07■□□□□ 0.32
C9orf3-204ENST00000424143 STAT6P42226 847 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 GNAQP50148 359 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 GYS2P54840 703 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 AFAP1L1Q8TED9 768 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 AK8Q96MA6 479 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
C9orf3-204ENST00000424143 ABCB11O95342 1321 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms