RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SNRNP48Q6IEG0 339 aaKnown RBP18.02■□□□□ 0.48
USB1-202ENST00000423271 PRPF38AQ8NAV1 312 aaKnown RBP18.02■□□□□ 0.48
USB1-202ENST00000423271 KIFC2Q96AC6 838 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 TEX13BQ9BXU2 312 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 PRO3102Q9H379 93 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 SLC5A4Q9NY91 659 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 ANAPC4Q9UJX5 808 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 RIPK3Q9Y572 518 aa18.02■□□□□ 0.48
USB1-202ENST00000423271 TSPY2A6NKD2 308 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 FGAP02671 866 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 KCTD2Q14681 263 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 ANO1Q5XXA6 986 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 IL17RBQ9NRM6 502 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 ZMYND8Q9ULU4 1186 aaPredicted RBP18.01■□□□□ 0.47
USB1-202ENST00000423271 DNAH12Q6ZR08 3092 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 LAMA3Q16787 3333 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 SZT2Q5T011 3432 aa18.01■□□□□ 0.47
USB1-202ENST00000423271 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
USB1-202ENST00000423271 RANBP6O60518 1105 aaKnown RBP18■□□□□ 0.47
USB1-202ENST00000423271 MSCO60682 206 aa18■□□□□ 0.47
USB1-202ENST00000423271 HSPD1P10809 573 aaKnown RBP18■□□□□ 0.47
USB1-202ENST00000423271 BMP3P12645 472 aa18■□□□□ 0.47
USB1-202ENST00000423271 COPB2P35606 906 aa18■□□□□ 0.47
USB1-202ENST00000423271 SLC4A3P48751 1232 aa18■□□□□ 0.47
USB1-202ENST00000423271 ZNF792Q3KQV3 632 aa18■□□□□ 0.47
USB1-202ENST00000423271 CPXCR1Q8N123 301 aa18■□□□□ 0.47
USB1-202ENST00000423271 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
USB1-202ENST00000423271 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
USB1-202ENST00000423271 RAVER2Q9HCJ3 691 aaKnown RBP18■□□□□ 0.47
USB1-202ENST00000423271 FEM1BQ9UK73 627 aa18■□□□□ 0.47
USB1-202ENST00000423271 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
USB1-202ENST00000423271 STX8Q9UNK0 236 aa18■□□□□ 0.47
USB1-202ENST00000423271 TMEM232C9JQI7 657 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 ORC4O43929 436 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 ZBED4O75132 1171 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 NEFLP07196 543 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 SDSP20132 328 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 LRRC26Q2I0M4 334 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
USB1-202ENST00000423271 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 SEPT4O43236 478 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 FGRP09769 529 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 SYN1P17600 705 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 MCCP23508 829 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 HAND2P61296 217 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
USB1-202ENST00000423271 SMCHD1A6NHR9 2005 aa17.98■□□□□ 0.47
USB1-202ENST00000423271 DNM1LO00429 736 aa17.97■□□□□ 0.47
USB1-202ENST00000423271 TAL1P17542 331 aaPredicted RBP17.97■□□□□ 0.47
USB1-202ENST00000423271 SLC1A4P43007 532 aa17.97■□□□□ 0.47
USB1-202ENST00000423271 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
USB1-202ENST00000423271 GJC2Q5T442 439 aaPredicted RBP17.97■□□□□ 0.47
USB1-202ENST00000423271 KCTD1Q719H9 257 aa17.97■□□□□ 0.47
USB1-202ENST00000423271 TINF2Q9BSI4 451 aa17.97■□□□□ 0.47
USB1-202ENST00000423271 SENP6Q9GZR1 1112 aaPredicted RBP17.97■□□□□ 0.47
USB1-202ENST00000423271 MTMR7Q9Y216 660 aa17.97■□□□□ 0.47
USB1-202ENST00000423271 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
USB1-202ENST00000423271 NOVP48745 357 aa17.96■□□□□ 0.47
USB1-202ENST00000423271 STAT2P52630 851 aa17.96■□□□□ 0.47
USB1-202ENST00000423271 PPP4R3BQ5MIZ7 849 aa17.96■□□□□ 0.47
USB1-202ENST00000423271 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
USB1-202ENST00000423271 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 DNAJC25-GNG10A0A024R161 153 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 PDE4AP27815 886 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 ATN1P54259 1190 aaPredicted RBP17.95■□□□□ 0.46
USB1-202ENST00000423271 OAZ1P54368 228 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
USB1-202ENST00000423271 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
USB1-202ENST00000423271 FAM160B2Q86V87 743 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 STAG1Q8WVM7 1258 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 ZNF536O15090 1300 aa17.95■□□□□ 0.46
USB1-202ENST00000423271 MCM3APO60318 1980 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
USB1-202ENST00000423271 ZNF865P0CJ78 1059 aaPredicted RBP17.94■□□□□ 0.46
USB1-202ENST00000423271 SNAP25P60880 206 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.94■□□□□ 0.46
USB1-202ENST00000423271 CHURC1Q8WUH1 139 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 LENG1Q96BZ8 264 aaPredicted RBP17.94■□□□□ 0.46
USB1-202ENST00000423271 FGD4Q96M96 766 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 AGBL1Q96MI9 1066 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 GDF15Q99988 308 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 NRBP1Q9UHY1 535 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 NEDD4P46934 1319 aa17.94■□□□□ 0.46
USB1-202ENST00000423271 MAGEA10P43363 369 aaPredicted RBP17.93■□□□□ 0.46
USB1-202ENST00000423271 MFAP1P55081 439 aaKnown RBP17.93■□□□□ 0.46
USB1-202ENST00000423271 LRRC41Q15345 812 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 CCDC96Q2M329 555 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 AKNAD1Q5T1N1 836 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 CCDC174Q6PII3 467 aa17.93■□□□□ 0.46
USB1-202ENST00000423271 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms