RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
SREBF1-206ENST00000423161 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
SREBF1-206ENST00000423161 LRRC41Q15345 812 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 LRIT3Q3SXY7 679 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 ANKRD45Q5TZF3 282 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 CPXCR1Q8N123 301 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 NEDD1Q8NHV4 660 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 KIFC2Q96AC6 838 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 SYNPO2Q9UMS6 1093 aa21.99■■□□□ 1.11
SREBF1-206ENST00000423161 ZBED4O75132 1171 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 SLC39A5Q6ZMH5 540 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 CCDC129Q6ZRS4 1044 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 GMCL1P1Q8NEA9 526 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 LBHD1Q9BQE6 289 aaPredicted RBP21.98■■□□□ 1.11
SREBF1-206ENST00000423161 PRKAG2Q9UGJ0 569 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 FEM1BQ9UK73 627 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 RIPK3Q9Y572 518 aa21.98■■□□□ 1.11
SREBF1-206ENST00000423161 ATP2A1O14983 1001 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 RARBP10826 455 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 TAL1P17542 331 aaPredicted RBP21.97■■□□□ 1.11
SREBF1-206ENST00000423161 ADCYAP1R1P41586 468 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 TFAP4Q01664 338 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 SLC38A10Q9HBR0 1119 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 RAVER2Q9HCJ3 691 aaKnown RBP21.97■■□□□ 1.11
SREBF1-206ENST00000423161 XPNPEP3Q9NQH7 507 aa21.97■■□□□ 1.11
SREBF1-206ENST00000423161 FOXP2O15409 715 aa21.96■■□□□ 1.11
SREBF1-206ENST00000423161 SLFN13Q68D06 897 aa21.96■■□□□ 1.11
SREBF1-206ENST00000423161 GPR153Q6NV75 609 aa21.96■■□□□ 1.11
SREBF1-206ENST00000423161 FERMT2Q96AC1 680 aa21.96■■□□□ 1.11
SREBF1-206ENST00000423161 ISY1Q9ULR0 285 aaKnown RBP21.96■■□□□ 1.11
SREBF1-206ENST00000423161 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
SREBF1-206ENST00000423161 ZNF865P0CJ78 1059 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-206ENST00000423161 BMP3P12645 472 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 AKR1A1P14550 325 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 CTDSPL2Q05D32 466 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 SNX17Q15036 470 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 TRIM60Q495X7 471 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 EVI5LQ96CN4 794 aa21.95■■□□□ 1.1
SREBF1-206ENST00000423161 DNAJC25-GNG10A0A024R161 153 aa21.94■■□□□ 1.1
SREBF1-206ENST00000423161 PGK1P00558 417 aa21.94■■□□□ 1.1
SREBF1-206ENST00000423161 HDAC1Q13547 482 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-206ENST00000423161 RNF180Q86T96 592 aa21.94■■□□□ 1.1
SREBF1-206ENST00000423161 MSL3Q8N5Y2 521 aaKnown RBP21.94■■□□□ 1.1
SREBF1-206ENST00000423161 LENG1Q96BZ8 264 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-206ENST00000423161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.94■■□□□ 1.18e-6■■■□□ 18.6
SREBF1-206ENST00000423161 SYNGAP1Q96PV0 1343 aa21.94■■□□□ 1.1
SREBF1-206ENST00000423161 TSPY2A6NKD2 308 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 TMEM232C9JQI7 657 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 OAZ1P54368 228 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 PDE1AP54750 535 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 PPP4R3BQ5MIZ7 849 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.93■■□□□ 1.1
SREBF1-206ENST00000423161 DEFB123Q8N688 67 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 PRDM5Q9NQX1 630 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-206ENST00000423161 FBXO40Q9UH90 709 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 PHF24Q9UPV7 400 aa21.93■■□□□ 1.1
SREBF1-206ENST00000423161 SNAI1O95863 264 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-206ENST00000423161 FDX1P10109 184 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 STAT2P52630 851 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-206ENST00000423161 VPS53Q5VIR6 699 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 MAMDC4Q6UXC1 1216 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 ANKRD35Q8N283 1001 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 CHMP4CQ96CF2 233 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 GMCL1Q96IK5 515 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 STX8Q9UNK0 236 aa21.92■■□□□ 1.1
SREBF1-206ENST00000423161 SLC1A4P43007 532 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 C1orf53Q5VUE5 145 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 Q7L0L9 218 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 ZNF467Q7Z7K2 595 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-206ENST00000423161 FAM160B2Q86V87 743 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 CHURC1Q8WUH1 139 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 INCENPQ9NQS7 918 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 PDLIM7Q9NR12 457 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 HELLSQ9NRZ9 838 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 HOMER2Q9NSB8 354 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 ZHX1Q9UKY1 873 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-206ENST00000423161 FAM184BQ9ULE4 1060 aa21.91■■□□□ 1.1
SREBF1-206ENST00000423161 NMT2O60551 498 aa21.9■■□□□ 1.1
SREBF1-206ENST00000423161 MCCP23508 829 aa21.9■■□□□ 1.1
SREBF1-206ENST00000423161 ANAPC4Q9UJX5 808 aa21.9■■□□□ 1.1
SREBF1-206ENST00000423161 COL6A3P12111 3177 aa21.9■■□□□ 1.1
SREBF1-206ENST00000423161 SYNRGQ9UMZ2 1314 aa21.89■■□□□ 1.1
SREBF1-206ENST00000423161 A0A1W2PQ45 241 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-206ENST00000423161 A0A1W2PQY0 241 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 RANBP6O60518 1105 aaKnown RBP21.89■■□□□ 1.09
SREBF1-206ENST00000423161 ADAMTS4O75173 837 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 STAG1Q8WVM7 1258 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 FAM227BQ96M60 508 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 FGD4Q96M96 766 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 IL17RBQ9NRM6 502 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-206ENST00000423161 TACC3Q9Y6A5 838 aa21.89■■□□□ 1.09
SREBF1-206ENST00000423161 LAMA2P24043 3122 aaKnown RBP21.89■■□□□ 1.09
SREBF1-206ENST00000423161 A0A0D9SFI3 127 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 TLE2Q04725 743 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 ALX1Q15699 326 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms