RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 HDAC9Q9UKV0 1011 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 DPEP1P16444 411 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 MCM7P33993 719 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 CACNB3P54284 484 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 EIF6P56537 245 aaKnown RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 PNOCQ13519 176 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 SLC35G1Q2M3R5 365 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 CFAP100Q494V2 611 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 CERKLQ49MI3 558 aaPredicted RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 DNTTIP2Q5QJE6 756 aaKnown RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 SARM1Q6SZW1 724 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 PYM1Q9BRP8 204 aaKnown RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 ZMYND12Q9H0C1 365 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 RIOX1Q9H6W3 641 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 SPTLC3Q9NUV7 552 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 TMOD2Q9NZR1 351 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 PCDHA6Q9UN73 950 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 PCDHA8Q9Y5H6 950 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 MYH4Q9Y623 1939 aa10.27□□□□□ -0.76
SNX20-203ENST00000423026 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 A0A087WWV3 80 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 SMCO2A6NFE2 343 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 ENTPD3O75355 529 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 ZNF75DP51815 510 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 POSTNQ15063 836 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 DPCR1Q3MIW9 517 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 NOM1Q5C9Z4 860 aaKnown RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 ARL6IP4Q66PJ3 421 aaKnown RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 METTL16Q86W50 562 aaKnown RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 ZFPM1Q8IX07 1006 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 AOPEPQ8N6M6 819 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 UBA5Q9GZZ9 404 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 TDRD3Q9H7E2 651 aaKnown RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 PCDHAC2Q9Y5I4 1007 aa10.27□□□□□ -0.77
SNX20-203ENST00000423026 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.77
SNX20-203ENST00000423026 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 YDJCA8MPS7 323 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 M0R2N6 131 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNX20-203ENST00000423026 GPATCH4Q5T3I0 446 aaKnown RBP10.26□□□□□ -0.77
SNX20-203ENST00000423026 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
SNX20-203ENST00000423026 PLA2G4DQ86XP0 818 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 PDILTQ8N807 584 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 SPC24Q8NBT2 197 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 PIGSQ96S52 555 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 CPVLQ9H3G5 476 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 PSME4Q14997 1843 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 DDTLA6NHG4 134 aaPredicted RBP10.26□□□□□ -0.77
SNX20-203ENST00000423026 SMC2O95347 1197 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 TXLNAP40222 546 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 ZNF543Q08ER8 600 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 CCDC96Q2M329 555 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 RASGRP2Q7LDG7 609 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 RASGRP4Q8TDF6 673 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
SNX20-203ENST00000423026 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 DHX58Q96C10 678 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 EPSTI1Q96J88 318 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 GPCPD1Q9NPB8 672 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 TMEM51Q9NW97 253 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 DACH1Q9UI36 760 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 PCDHA5Q9Y5H7 936 aa10.26□□□□□ -0.77
SNX20-203ENST00000423026 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 WNT7AO00755 349 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 KCNA3P22001 575 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 CDC25BP30305 580 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 LONP1P36776 959 aaKnown RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 TGFB2P61812 414 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 NONOQ15233 471 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNX20-203ENST00000423026 DLGAP5Q15398 846 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 ISM2Q6H9L7 571 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 USP49Q70CQ1 688 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 PRMT6Q96LA8 375 aaPredicted RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 ZNF277Q9NRM2 450 aaPredicted RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 NYAP2Q9P242 653 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 LAD1O00515 517 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 IKBKBO14920 756 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 ACTN4O43707 911 aaKnown RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 RAD17O75943 681 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 VIL1P09327 827 aaKnown RBP10.25□□□□□ -0.77
SNX20-203ENST00000423026 SLFN14P0C7P3 912 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 POLD1P28340 1107 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 INF2Q27J81 1249 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 TATDN1Q6P1N9 297 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 DTHD1Q6ZMT9 781 aa10.25□□□□□ -0.77
SNX20-203ENST00000423026 TMEM179Q6ZVK1 233 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms