RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 NAALADL2Q58DX5 795 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 PNMA1Q8ND90 353 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.81■□□□□ 0.44
CDH1-202ENST00000422392 ARHGAP25P42331 645 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
CDH1-202ENST00000422392 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 TMTC1Q8IUR5 882 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
CDH1-202ENST00000422392 MYH1P12882 1939 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 INF2Q27J81 1249 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 ARPP21Q9UBL0 812 aaPredicted RBP17.8■□□□□ 0.44
CDH1-202ENST00000422392 SRP68Q9UHB9 627 aaKnown RBP17.8■□□□□ 0.44
CDH1-202ENST00000422392 TTF2Q9UNY4 1162 aaKnown RBP17.8■□□□□ 0.44
CDH1-202ENST00000422392 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
CDH1-202ENST00000422392 ATP8B1O43520 1251 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 PARP1P09874 1014 aaKnown RBP17.8■□□□□ 0.44
CDH1-202ENST00000422392 FECHP22830 423 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 CYP26C1Q6V0L0 522 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 SLC44A5Q8NCS7 719 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 CCDC51Q96ER9 411 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 PCDHA4Q9UN74 947 aa17.8■□□□□ 0.44
CDH1-202ENST00000422392 TTC26A0AVF1 554 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 H3BQF6 201 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 KIF5BP33176 963 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 LONP1P36776 959 aaKnown RBP17.79■□□□□ 0.44
CDH1-202ENST00000422392 REXO2Q9Y3B8 237 aaKnown RBP17.79■□□□□ 0.44
CDH1-202ENST00000422392 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
CDH1-202ENST00000422392 CCDC151A5D8V7 595 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 GOLGA8HP0CJ92 632 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 MCM6Q14566 821 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 NCAPH2Q6IBW4 605 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 HEATR3Q7Z4Q2 680 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 DZIP1Q86YF9 867 aaKnown RBP17.79■□□□□ 0.44
CDH1-202ENST00000422392 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 GUCA1BQ9UMX6 200 aa17.79■□□□□ 0.44
CDH1-202ENST00000422392 CCDC194A0A1B0GVG4 234 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 CYTH3O43739 400 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 SPAG1Q07617 926 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 ARL6IP4Q66PJ3 421 aaKnown RBP17.78■□□□□ 0.44
CDH1-202ENST00000422392 CEP112Q8N8E3 955 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 NAPGQ99747 312 aaPredicted RBP17.78■□□□□ 0.44
CDH1-202ENST00000422392 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 CCDC66A2RUB6 948 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 ENC1O14682 589 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 CALML3P27482 149 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 DTHD1Q6ZMT9 781 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 ADSSL1Q8N142 457 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
CDH1-202ENST00000422392 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
CDH1-202ENST00000422392 GOLGB1Q14789 3259 aaKnown RBP17.77■□□□□ 0.44
CDH1-202ENST00000422392 USP5P45974 858 aa17.77■□□□□ 0.44
CDH1-202ENST00000422392 DIXDC1Q155Q3 683 aa17.77■□□□□ 0.44
CDH1-202ENST00000422392 SBK1Q52WX2 424 aa17.77■□□□□ 0.44
CDH1-202ENST00000422392 NOA1Q8NC60 698 aaKnown RBP17.77■□□□□ 0.44
CDH1-202ENST00000422392 M0R2N6 131 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 GRIK5Q16478 980 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 SH3RF3Q8TEJ3 882 aaPredicted RBP17.77■□□□□ 0.43
CDH1-202ENST00000422392 NLRP3Q96P20 1036 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 ABCB6Q9NP58 842 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.43
CDH1-202ENST00000422392 HDAC6Q9UBN7 1215 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 STX8Q9UNK0 236 aa17.77■□□□□ 0.43
CDH1-202ENST00000422392 EPN1Q9Y6I3 576 aaPredicted RBP17.77■□□□□ 0.43
CDH1-202ENST00000422392 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 KLRC4O43908 158 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 NDUFA10O95299 355 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 UBA7P41226 1012 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 VSNL1P62760 191 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 BEND6Q5SZJ8 279 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 C12orf60Q5U649 245 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 TRIM47Q96LD4 638 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 KLK7P49862 253 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 BRD3Q15059 726 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
CDH1-202ENST00000422392 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
CDH1-202ENST00000422392 B4DLN1 442 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 H7C1D1 291 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 MAP2K7O14733 419 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 NKRFO15226 690 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDH1-202ENST00000422392 HNRNPH2P55795 449 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms