RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CDK8P49336 464 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 GYS2P54840 703 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 IKQ13123 557 aaPredicted RBP15.06■□□□□ 0
MCF2L-213ENST00000421756 UBE2SQ16763 222 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 SPATA1Q5VX52 437 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 ZNF804AQ7Z570 1209 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 ZCCHC17Q9NP64 241 aaKnown RBP15.06■□□□□ 0
MCF2L-213ENST00000421756 SLC39A2Q9NP94 309 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 0
MCF2L-213ENST00000421756 RPN1P04843 607 aaKnown RBP15.06■□□□□ 0
MCF2L-213ENST00000421756 SERPINB2P05120 415 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 LRRC41Q15345 812 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 PSMB7Q99436 277 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 CHP1Q99653 195 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 CD209Q9NNX6 404 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.06■□□□□ 0
MCF2L-213ENST00000421756 PPP1R3GB7ZBB8 358 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 FCER1AP12319 257 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 PAK1Q13153 545 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 KCTD1Q719H9 257 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 PLEKHA4Q9H4M7 779 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 KCNQ5Q9NR82 932 aa15.06■□□□□ 0
MCF2L-213ENST00000421756 SEC63Q9UGP8 760 aaKnown RBP15.06■□□□□ 0
MCF2L-213ENST00000421756 DDAH1O94760 285 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 TPM1P09493 284 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 CLCN6P51797 869 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ 0
MCF2L-213ENST00000421756 TRIM65Q6PJ69 517 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 DPP8Q6V1X1 898 aaPredicted RBP15.05■□□□□ 0
MCF2L-213ENST00000421756 ZNF397Q8NF99 534 aaPredicted RBP15.05■□□□□ 0
MCF2L-213ENST00000421756 ZNF622Q969S3 477 aaKnown RBP eCLIP15.05■□□□□ 0
MCF2L-213ENST00000421756 CAPZA3Q96KX2 299 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 ANAPC4Q9UJX5 808 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 GGA1Q9UJY5 639 aa15.05■□□□□ 0
MCF2L-213ENST00000421756 SARSP49591 514 aaKnown RBP15.05■□□□□ -0
MCF2L-213ENST00000421756 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
MCF2L-213ENST00000421756 TTBK2Q6IQ55 1244 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 FERMT2Q96AC1 680 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 MYH7P12883 1935 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 KCNJ18B7U540 433 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
MCF2L-213ENST00000421756 KCNJ12Q14500 433 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 TXNRD1Q16881 649 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 WDR66Q8TBY9 1149 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 MAD2L2Q9UI95 211 aa15.05■□□□□ -0
MCF2L-213ENST00000421756 SCAF8Q9UPN6 1271 aaKnown RBP15.05■□□□□ -0
MCF2L-213ENST00000421756 ZNF18P17022 549 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 GRAPQ13588 217 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
MCF2L-213ENST00000421756 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 POLLQ9UGP5 575 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 STRCQ7RTU9 1775 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
MCF2L-213ENST00000421756 POTEMA6NI47 508 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 B4DLN1 442 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PLCG1P19174 1290 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 RASA1P20936 1047 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PPARDQ03181 441 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PDE4DQ08499 809 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 NR1I3Q14994 352 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 KIAA0825Q8IV33 1275 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 ANKRD20A12PQ8NF67 263 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 PCDHA4Q9UN74 947 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 CCDC175P0C221 793 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 ZSCAN20P17040 1043 aaPredicted RBP15.04■□□□□ -0
MCF2L-213ENST00000421756 PPP2R3AQ06190 1150 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 TBCKQ8TEA7 893 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 TANGO6Q9C0B7 1094 aa15.04■□□□□ -0
MCF2L-213ENST00000421756 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 SLC30A10Q6XR72 485 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 TMEM139Q8IV31 216 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 ZNF446Q9NWS9 450 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 MYH3P11055 1940 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 MTIF2P46199 727 aaKnown RBP15.03■□□□□ -0
MCF2L-213ENST00000421756 CYP27A1Q02318 531 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 MCM6Q14566 821 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 POTEDQ86YR6 584 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 CDK5RAP3Q96JB5 506 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 TTF2Q9UNY4 1162 aaKnown RBP15.03■□□□□ -0
MCF2L-213ENST00000421756 ABCC6O95255 1503 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 GYPCP04921 128 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
MCF2L-213ENST00000421756 PHACTR2O75167 634 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 TDP2O95551 362 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 TRIM21P19474 475 aaKnown RBP15.02■□□□□ -0
MCF2L-213ENST00000421756 PTPROQ16827 1216 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 TMCO3Q6UWJ1 677 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 SEPT12Q8IYM1 358 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 SLC35F6Q8N357 371 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
MCF2L-213ENST00000421756 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
MCF2L-213ENST00000421756 ORC4O43929 436 aa15.02□□□□□ -0.01
MCF2L-213ENST00000421756 SRGAP2O75044 1071 aa15.02□□□□□ -0.01
MCF2L-213ENST00000421756 ZMYND10O75800 440 aa15.02□□□□□ -0.01
MCF2L-213ENST00000421756 CALML3P27482 149 aa15.02□□□□□ -0.01
MCF2L-213ENST00000421756 COPB1P53618 953 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms