RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 HERC5Q9UII4 1024 aaKnown RBP9.13□□□□□ -0.95
AC012560.1-202ENST00000421324 PALD1Q9ULE6 856 aa9.13□□□□□ -0.95
AC012560.1-202ENST00000421324 ZHX2Q9Y6X8 837 aa9.13□□□□□ -0.95
AC012560.1-202ENST00000421324 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
AC012560.1-202ENST00000421324 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 ATRNL1Q5VV63 1379 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 FLT1P17948 1338 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 ZNF532Q9HCE3 1301 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 GPR25O00155 361 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 CXCL11O14625 94 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 SPINT1O43278 529 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 BRI3BPQ8WY22 251 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 EDC3Q96F86 508 aaKnown RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 PTPN18Q99952 460 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 ZFYVE28Q9HCC9 887 aa9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
AC012560.1-202ENST00000421324 TTC41PQ6P2S7 1318 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 FKTNO75072 461 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 PTPRAP18433 802 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 ADD2P35612 726 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 CAP2P40123 477 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 DGKZQ13574 1117 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 UBE3CQ15386 1083 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 TAF1CQ15572 869 aaPredicted RBP9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 FASTKD5Q7L8L6 764 aaKnown RBP9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 ZNF296Q8WUU4 475 aaPredicted RBP9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 RIOK1Q9BRS2 568 aaKnown RBP9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 KCNH4Q9UQ05 1017 aa9.11□□□□□ -0.95
AC012560.1-202ENST00000421324 TCRBV5S4A2TA0A5A2 114 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 BTBD19C9JJ37 291 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 GLRX3O76003 335 aaKnown RBP9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 POLR3DP05423 398 aaPredicted RBP9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 CRHR2Q13324 411 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 CTU1Q7Z7A3 348 aaKnown RBP9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 FAM43AQ8N2R8 423 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 R3HDMLQ9H3Y0 253 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 ZCCHC17Q9NP64 241 aaKnown RBP9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 DNMT3LQ9UJW3 386 aa9.1□□□□□ -0.95
AC012560.1-202ENST00000421324 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ZFYP08048 801 aaPredicted RBP9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ASNSP08243 561 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 MX1P20591 662 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 SP3Q02447 781 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 PKN2Q16513 984 aaKnown RBP9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 TSHZ3Q63HK5 1081 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ANKRD23Q86SG2 305 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 AMOTL1Q8IY63 956 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 LCORLQ8N3X6 602 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ABHD8Q96I13 439 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 MCOLN1Q9GZU1 580 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 ARMT1Q9H993 441 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 AS3MTQ9HBK9 375 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 PRM3Q9NNZ6 103 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 GINM1Q9NU53 330 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 SERPINB13Q9UIV8 391 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 AFG3L2Q9Y4W6 797 aa9.09□□□□□ -0.95
AC012560.1-202ENST00000421324 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 TRIM75PA6NK02 468 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 PDHXO00330 501 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 MBD4O95243 580 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 ADH1AP07327 375 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 SPP2Q13103 211 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 B4GALNT3Q6L9W6 998 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 GADL1Q6ZQY3 521 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 ZNF280CQ8ND82 737 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 OTUD7AQ8TE49 926 aaPredicted RBP9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 SDR42E1Q8WUS8 393 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 EHD4Q9H223 541 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 ATP8A2Q9NTI2 1148 aa9.08□□□□□ -0.96
AC012560.1-202ENST00000421324 MAST2Q6P0Q8 1798 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 OTOFQ9HC10 1997 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 A0A0G2JLL6 359 aaPredicted RBP9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 H3BM21 787 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 PRKAB2O43741 272 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 MAN1A2O60476 641 aa9.07□□□□□ -0.96
AC012560.1-202ENST00000421324 TLR2O60603 784 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms