RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 UBE3CQ15386 1083 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
LINC00339-203ENST00000420503 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-203ENST00000420503 KANSL2Q9H9L4 492 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-203ENST00000420503 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-203ENST00000420503 MYH4Q9Y623 1939 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 GRXCR1A8MXD5 290 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 PRDM1O75626 825 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 FOSL2P15408 326 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 ACLYP53396 1101 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 GRIN2CQ14957 1233 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 CCSAPQ6IQ19 270 aaPredicted RBP15.47■□□□□ 0.07
LINC00339-203ENST00000420503 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
LINC00339-203ENST00000420503 SLF1Q9BQI6 1058 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 RAVER2Q9HCJ3 691 aaKnown RBP15.47■□□□□ 0.07
LINC00339-203ENST00000420503 GOPCQ9HD26 462 aa15.47■□□□□ 0.07
LINC00339-203ENST00000420503 DNAJC25-GNG10A0A024R161 153 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 GSG1L2A8MUP6 293 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 AKR1A1P14550 325 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 RAG1P15918 1043 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 KCNA10Q16322 511 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 RNF180Q86T96 592 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 KLHDC9Q8NEP7 349 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 OSBP2Q969R2 916 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00339-203ENST00000420503 TMEM39AQ9NV64 488 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 NRBP1Q9UHY1 535 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 TACC3Q9Y6A5 838 aa15.46■□□□□ 0.07
LINC00339-203ENST00000420503 MINDY4BA8MYZ0 360 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 F5H6K3 240 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 HMMRO75330 724 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 PBX2P40425 430 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 FPGSQ05932 587 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 KLRC3Q07444 240 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 RASGRP2Q7LDG7 609 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
LINC00339-203ENST00000420503 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-203ENST00000420503 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 STARD7Q9NQZ5 370 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 CNPY2Q9Y2B0 182 aa15.45■□□□□ 0.06
LINC00339-203ENST00000420503 DIS3Q9Y2L1 958 aaKnown RBP15.45■□□□□ 0.06
LINC00339-203ENST00000420503 IGKV6D-41A0A0C4DH26 115 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 M0R2C6 588 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 DNAJB2P25686 324 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 TBX21Q9UL17 535 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
LINC00339-203ENST00000420503 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-203ENST00000420503 CTAGE5O15320 804 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 ACRP10323 421 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 ANKRD33Q7Z3H0 272 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 HOMER2Q9NSB8 354 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-203ENST00000420503 ARPP21Q9UBL0 812 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-203ENST00000420503 CLIP2Q9UDT6 1046 aa15.43■□□□□ 0.06
LINC00339-203ENST00000420503 C6orf222P0C671 652 aaPredicted RBP15.42■□□□□ 0.06
LINC00339-203ENST00000420503 SNAP25P60880 206 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 BEX3Q00994 111 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 TMEM63BQ5T3F8 832 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 MAMDC4Q6UXC1 1216 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
LINC00339-203ENST00000420503 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 NYAP2Q9P242 653 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 LRRC37A2A6NM11 1700 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 GBF1Q92538 1859 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 ASTN1O14525 1302 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 UMODL1Q5DID0 1318 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 SYNGAP1Q96PV0 1343 aa15.42■□□□□ 0.06
LINC00339-203ENST00000420503 LCTP09848 1927 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 MUC3AQ02505 3323 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 TIMP1P01033 207 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 ASGR1P07306 291 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 CSF2RAP15509 400 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 ACVR2BQ13705 512 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 TSEN34Q9BSV6 310 aaKnown RBP15.41■□□□□ 0.06
LINC00339-203ENST00000420503 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 SLC38A10Q9HBR0 1119 aa15.41■□□□□ 0.06
LINC00339-203ENST00000420503 CHD9Q3L8U1 2897 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 GPAA1O43292 621 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 CDK7P50613 346 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms