RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 DGKHQ86XP1 1220 aa21.4■■□□□ 1.02
ECHDC3-202ENST00000420401 PRPF38AQ8NAV1 312 aaKnown RBP21.4■■□□□ 1.02
ECHDC3-202ENST00000420401 ZSWIM5Q9P217 1185 aa21.4■■□□□ 1.02
ECHDC3-202ENST00000420401 ISY1Q9ULR0 285 aaKnown RBP21.4■■□□□ 1.02
ECHDC3-202ENST00000420401 LAMA4Q16363 1823 aa21.4■■□□□ 1.02
ECHDC3-202ENST00000420401 VWA5AO00534 786 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 PLS1Q14651 629 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 PLEKHH3Q7Z736 793 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 ZSCAN10Q96SZ4 725 aaPredicted RBP21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 ZKSCAN3Q9BRR0 538 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 UBAC1Q9BSL1 405 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 SPATC1LQ9H0A9 340 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 PORCNQ9H237 461 aa21.39■■□□□ 1.01
ECHDC3-202ENST00000420401 MYH4Q9Y623 1939 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 RCSD1Q6JBY9 416 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 GPR142Q7Z601 462 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 RALYLQ86SE5 291 aaKnown RBP21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 C7orf61Q8IZ16 206 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 CHURC1Q8WUH1 139 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 DCAF4Q8WV16 495 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 CRISPLD2Q9H0B8 497 aa21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 CTDP1Q9Y5B0 961 aaPredicted RBP21.38■■□□□ 1.01
ECHDC3-202ENST00000420401 A0A0C4DFX4 3053 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 TMEM232C9JQI7 657 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 E7EWF7 191 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 ZBED4O75132 1171 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 TMEM132BQ14DG7 1078 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 FAM160B2Q86V87 743 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 SHCBP1Q8NEM2 672 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 NCOA7Q8NI08 942 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 SOCS4Q8WXH5 440 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 ANKS1AQ92625 1134 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 KIFC2Q96AC6 838 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 NUDT12Q9BQG2 462 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 MOV10L1Q9BXT6 1211 aaKnown RBP21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 MTMR7Q9Y216 660 aa21.37■■□□□ 1.01
ECHDC3-202ENST00000420401 PLA2G6O60733 806 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 FDX1P10109 184 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 BMP8BP34820 402 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 STAT2P52630 851 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 IKQ13123 557 aaPredicted RBP21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 ANKLE1Q8NAG6 615 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 DIS3LQ8TF46 1054 aaKnown RBP21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 CHMP4CQ96CF2 233 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 MROH8Q9H579 483 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 KAT14Q9H8E8 782 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 IVNS1ABPQ9Y6Y0 642 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 LAMA3Q16787 3333 aa21.36■■□□□ 1.01
ECHDC3-202ENST00000420401 SLC25A27O95847 323 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 COPB2P35606 906 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 STAT3P40763 770 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 MNX1P50219 401 aaPredicted RBP21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 CCDC96Q2M329 555 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 RNF20Q5VTR2 975 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 KCTD1Q719H9 257 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 GDF15Q99988 308 aa21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 ZMYND8Q9ULU4 1186 aaPredicted RBP21.35■■□□□ 1.01
ECHDC3-202ENST00000420401 TNKSO95271 1327 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 RLFQ13129 1914 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 SLC27A2O14975 620 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 STRNO43815 780 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 HMGCRP04035 888 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 ERCC3P19447 782 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 PTPREP23469 700 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 CREB3L3Q68CJ9 461 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 GPR153Q6NV75 609 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 NCAPG2Q86XI2 1143 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 RIOX2Q8IUF8 465 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 DEFB123Q8N688 67 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 HMX1Q9NP08 348 aaPredicted RBP21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 CUL9Q8IWT3 2517 aa21.34■■□□□ 1.01
ECHDC3-202ENST00000420401 ERICH2A1L162 156 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 SLC15A5A6NIM6 579 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 RGS2P41220 211 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 SART3Q15020 963 aaKnown RBP21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 MORN1Q5T089 497 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 CYB5R4Q7L1T6 521 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 PNMA1Q8ND90 353 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 REPS2Q8NFH8 660 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 TEX13BQ9BXU2 312 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 SLC38A10Q9HBR0 1119 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 TAF6LQ9Y6J9 622 aa21.33■■□□□ 1.01
ECHDC3-202ENST00000420401 RPTORQ8N122 1335 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 ATP2A1O14983 1001 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 PDHBP11177 359 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 XRCC5P13010 732 aaKnown RBP21.32■■□□□ 1
ECHDC3-202ENST00000420401 CYP2B6P20813 491 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 OAZ1P54368 228 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 STOX1Q6ZVD7 989 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 TRMT44Q8IYL2 757 aaKnown RBP21.32■■□□□ 1
ECHDC3-202ENST00000420401 ZNF214Q9UL59 606 aaPredicted RBP21.32■■□□□ 1
ECHDC3-202ENST00000420401 A0A0G2JMZ2 1700 aa21.32■■□□□ 1
ECHDC3-202ENST00000420401 IFIT3O14879 490 aaKnown RBP21.31■■□□□ 1
ECHDC3-202ENST00000420401 REC8O95072 547 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms